Pseudomonas tremae: I9H09_23055
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Entry
I9H09_23055 CDS
T08237
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
ptre
Pseudomonas tremae
Pathway
ptre02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I9H09_23055 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptre02000
]
I9H09_23055 (choW)
Transporters [BR:
ptre02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
I9H09_23055 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Trp_oprn_chp
DUF3464
Motif
Other DBs
NCBI-ProteinID:
UQB36348
LinkDB
All DBs
Position
5140181..5141026
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AA seq
281 aa
AA seq
DB search
MLIDQKIPLGEYIAAFVDWLTLNGADYFDAIASTLEMMIHGFTFALTWFNPLVLIGLIAA
LAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVPLGIIAAHKP
LFYTIIRPLLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVP
QELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPV
VNALNTADIALGFEAGLAIVLLAIMLDRICKQPEAKKGSDA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctgatagatcaaaaaatccctctgggcgagtacatcgccgcatttgtcgactggttg
acgctcaacggcgccgactacttcgacgcgattgcctcgacactggaaatgatgatccac
gggttcacgttcgcgctgacctggttcaacccactggtattgatcggcctgatcgccgcg
ctcgcgcacttcatccagcgcaagtggggcctgacggttttcgtgattctttcgtttctg
ttgatcctgaacctgcactactggcaggaaaccatggaaaccctggcccaggtcctgttc
gcgaccctggtctgtgttgtcatcggtgtgccgctgggcatcattgccgcgcacaagccg
ctgttctacaccatcatccggccgctgctggacctcatgcagacagtcccaaccttcgtt
tacctgatcccgacgctcacgctgttcggcctcggtgtcgttcccgggctgatctctaca
gtggtcttcgcgattgctgcgccgatacgcctgacgtacctgggcatccgtgacgtgcct
caggaactgctggacgccggcaaggccttcggctcgtcgcgtcgccagttgctgacccgg
atcgagctgccctacgcaatgccttccatcgccgccggtatcacccagtgcatcatgctg
tcactgtcgatggtagtaattgccgcactggtcggtgccgacggtctgggcaaacctgtg
gtcaacgcactgaacaccgccgatatcgccctcggtttcgaagccggtctggcaatcgta
ttgctggcaatcatgctcgaccgtatctgcaaacaacccgaagccaagaaagggtccgac
gcatga
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