Pseudomonas tremae: I9H09_23065
Help
Entry
I9H09_23065 CDS
T08237
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre00260
Glycine, serine and threonine metabolism
ptre00460
Cyanoamino acid metabolism
ptre00630
Glyoxylate and dicarboxylate metabolism
ptre00670
One carbon pool by folate
ptre00680
Methane metabolism
ptre01100
Metabolic pathways
ptre01110
Biosynthesis of secondary metabolites
ptre01120
Microbial metabolism in diverse environments
ptre01200
Carbon metabolism
ptre01230
Biosynthesis of amino acids
ptre01240
Biosynthesis of cofactors
ptre04981
Folate transport and metabolism
Module
ptre_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
I9H09_23065
09102 Energy metabolism
00680 Methane metabolism
I9H09_23065
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I9H09_23065
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
I9H09_23065
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
I9H09_23065
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
I9H09_23065
Enzymes [BR:
ptre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
I9H09_23065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UQB36350
LinkDB
All DBs
Position
5142457..5143710
Genome browser
AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLSAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIERAKQLFGADYANVQPHSGSQANAAVYLALLQAGDTVLGMS
LAHGGHLTHGAKVSFSGKLYNAVQYGIDTTTGLIDYDEVERIAVESQPKMIIAGFSAYSK
TLDFPRFRAIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEELEKKFNSAVFPGGQGGPLMHVIAAKAVCFKEAMEPGFKAYQQQVIDNAQAMAQ
VFIERGFDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNSVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCIELAGWICDILDNLGDADVEANVASQVATLCTEFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagattcagggttatgacgatgcactgctgtcggcgatgaat
gccgaagagcagcgtcaggaagaccatatcgagctgatcgcctcggagaactacaccagc
aaacgcgttatgcaggctcagggcagcggcctaaccaacaaatacgccgaaggttatccc
ggcaagcgttactacggcggttgcgagcatgtcgacaaggtcgagcaactggccatcgag
cgcgccaagcagttgtttggtgccgactacgcgaatgtgcagccgcactccggcagccag
gccaacgctgcggtctatctggcgctgcttcaggcgggcgacaccgtactgggcatgagc
ctggcgcacggcggtcacctgacccacggcgccaaggtcagcttttcgggcaaactctat
aatgccgtgcagtacggcatcgacaccacgacagggctgatcgattacgacgaggtcgag
cgcatcgccgtcgaaagccagccgaaaatgatcattgccggtttctcggcctattcaaaa
acgctcgatttcccgcgtttccgcgcaatcgccgacaaggtgggcgcttacctgttcgtc
gacatggcccacgtcgcagggctggtcgccgcagggctttatccaaacccgctgccctat
gccgatgtggtcaccaccaccacgcacaagaccctgcgcggcccacgcggcggcctgatt
ctggccaaggccaacgaagagctggagaagaaattcaattccgccgtcttccccggtggt
cagggtggcccgctgatgcacgtaatcgccgccaaggcagtgtgtttcaaggaggctatg
gagcccggcttcaaggcttatcagcaacaggtcatcgacaacgcacaagcaatggcacag
gtattcatcgaacgtggcttcgacgtggtttccggtggcaccgacaaccacctgtttctg
gtcagcctgatccgtcagggcctgaccggcaaggacgccgacgctgcgctgggtcgtgcg
cacatcaccgtcaacaagaactctgtgcccaacgacccacagtcgcccttcgtgacctcg
ggcctgcgcatcggcacaccggccgtcaccacccgcggcttcaaggtgacccagtgcatc
gaactggcaggctggatctgcgacatcctcgacaacctcggcgacgccgatgtcgaggcc
aacgtcgccagtcaggtcgcaaccctgtgcaccgaattcccggtttatcgctga
DBGET
integrated database retrieval system