Pseudomonas tremae: I9H09_23265
Help
Entry
I9H09_23265 CDS
T08237
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I9H09_23265 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptre03400
]
I9H09_23265 (mutM)
Enzymes [BR:
ptre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
I9H09_23265 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
I9H09_23265 (mutM)
DNA repair and recombination proteins [BR:
ptre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I9H09_23265 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
UQB36388
LinkDB
All DBs
Position
complement(5182926..5183738)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL
LIQAEVGTLISHLGMSGNLRLVEAGLPALKHEHVDIELESGLALRYTDPRRFGAMLWSLD
PHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRARYLKLAIEIKRILAYAIERGGTTLRDFIGGDGKPGYFQQELFVYGR
GGLPCKVCGTLLREIKLGQRASVYCPKCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagtcgaaaccacccgccgcggcattgcgccgcatcttgaaggg
cagcgcgtcagccgtgtgatcgtacgcgacagccgtttgcgctggcccatccccgaagat
ctggacgtccgcctgtccgggcagcgcatcgtgcaggtggatcggcgcgccaagtacctg
ctgatccaggccgaagtgggtacgttgataagtcacctgggcatgtcaggcaacctgcgc
ctggtcgaagccggccttcctgcgctcaagcacgagcatgtcgatatcgaactggagtcc
gggttggcattgcgctacacagacccgcgtcggttcggcgccatgctctggagccttgat
ccacataaccacgaattgctgattcgcctcggaccggagccactgacggatctgttcgac
ggcgagcgcctttacgagcgctcgcgtggcaagtcgatcgcggtcaaaccgtttgtcatg
gacaacgcggttgtggttggggtggggaatatctatgcgaccgaagcactgttcgcggcg
ggcatcgatccgcgccgcgaagccgggggtatctcccgggcgcggtatctgaagctggcg
atagagatcaagcgcattctggcctacgccatcgagcgtggcggcacgacgttgcgcgac
ttcattggcggcgatggcaagccagggtattttcagcaggaactgtttgtctacgggcgt
ggcggtctgccgtgcaaggtctgcggcacattgttgcgcgagatcaagctgggtcagcgt
gccagcgtctactgcccgaagtgtcaacgctga
DBGET
integrated database retrieval system
