Pseudomonas tremae: I9H09_25010
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Entry
I9H09_25010 CDS
T08237
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre00300
Lysine biosynthesis
ptre00470
D-Amino acid metabolism
ptre01100
Metabolic pathways
ptre01110
Biosynthesis of secondary metabolites
ptre01120
Microbial metabolism in diverse environments
ptre01230
Biosynthesis of amino acids
Module
ptre_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I9H09_25010 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I9H09_25010 (lysA)
Enzymes [BR:
ptre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
I9H09_25010 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UQB36704
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Position
5538758..5540005
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQDVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED
VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLQLVDRLGDCGIHLHHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGVLLSRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDGEARAYDIVGPICETGDFLAKGRELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGTQAFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcaactaccgcgacggtgagctgttcgcggaaggggtagcattgtctgcc
attgccgagcgcttcggcacgccgacgtatgtctactcacgcgctcacatcgaggcgcaa
tatcgtgcctacgccgacgcgctgagcggtatgccgcacatggtctgcttcgccgtcaaa
gccaactccaacctgggtgtgctcaatgtcctggcgcgtcttggcgccggtttcgacatt
gtgtcgcgtggtgaacttgagcgcgtgctggccgctggcggcaaggcggagaagatcgtc
ttctccggcgtcggcaagacccgtgaagacatgcgccgcgccctcgaagtcggcgtgcac
tgctttaacgtcgaatccaccgacgaactggagcgcctgcaggacgtcgccgctgaactc
aacgttcgtgcgccgatttcgctgcgcgtcaatccggacgtggacgcgggcacccacccg
tacatctccaccggcctgaaagaaaacaagttcggcatcgccattgcggcggccgaagac
gtttacattcgcgcctcgcagttgccgaacctcgaagtgatcggcgtcgattgccacatc
ggttcgcagctgaccacgcttgagccgttcatcgatgcactggatcgcctgctgcagttg
gtcgatcgtttgggcgattgcggtattcacttgcaccacattgacctgggtggaggcctg
ggtgtgcgttaccgcgatgaagagccaccgctggcagccgactacatcaaggctgtgcgc
gagcgtctggccggtcgcgacctgggcttgctgttcgaaccggggcgcttcatcgtcgcc
aacgccggcgtgctgctgagccgtgtcgaatacctcaagcataccgagcacaaggacttc
gccatcgtcgatgcggcgatgaacgacctgatccgcccggccctgtatcaggcctggatg
gacgtcacggcggtgcgccctcgtgacggcgaagctcgtgcctatgacatagtgggtccg
atctgcgagaccggtgattttctcgccaagggccgcgaactggcactggccgaaggcgat
ctgctggcggtgcattcagccggtgcctatggcttcgtcatgagctcgaactacaacacc
cgtggccgcgccgccgaggtattggtcgacggtactcaggcttttgaagtccgtcgtcgc
gaaaccgtggccgagctgttcgctggcgaaagcctgctgccggagtaa
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