KEGG   Pseudomonas tremae: I9H09_26325
Entry
I9H09_26325       CDS       T08237                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ptre  Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:ptre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptre03032]
    I9H09_26325
   03036 Chromosome and associated proteins [BR:ptre03036]
    I9H09_26325
   03400 DNA repair and recombination proteins [BR:ptre03400]
    I9H09_26325
DNA replication proteins [BR:ptre03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    I9H09_26325
Chromosome and associated proteins [BR:ptre03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    I9H09_26325
DNA repair and recombination proteins [BR:ptre03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      I9H09_26325
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 HU-HIG HU-CCDC81_euk_2 SSPI
Other DBs
NCBI-ProteinID: UQB39588
LinkDB
Position
p2:1498..1812
AA seq 104 aa
MALTKDQLVAGIAEAIDAPKTTARKTLEQLGQIVAEQLESGAEITLPGIGKLKVAERPAR
TGRNPSTGAAIEIAAKKAIKFVPAKVLNDAINHGASQKTENKTR
NT seq 315 nt   +upstreamnt  +downstreamnt
atggctctgacgaaagaccaattggttgccggtattgcagaagctatcgatgcgccaaaa
accaccgcgcgcaagactcttgagcaattgggacagatcgttgccgaacaactggaaagc
ggtgcagaaatcactctaccgggcatcggcaaactgaaagttgcagagcgtccagcacgt
actggccgcaacccttcgactggtgccgctatcgaaattgctgccaagaaagctatcaag
ttcgtccctgccaaggtgctgaacgacgcgatcaaccacggtgcgtctcagaaaacggaa
aataaaacacgttaa

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