Candidatus Paraimprobicoccus trichonymphae: RsTaC01_0050
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Entry
RsTaC01_0050 CDS
T09783
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptrh
Candidatus Paraimprobicoccus trichonymphae
Pathway
ptrh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RsTaC01_0050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrh03400
]
RsTaC01_0050
Enzymes [BR:
ptrh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RsTaC01_0050
DNA repair and recombination proteins [BR:
ptrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RsTaC01_0050
BRITE hierarchy
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BED92355
UniProt:
A0AA48L181
LinkDB
All DBs
Position
58964..59530
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AA seq
188 aa
AA seq
DB search
MYISWEELKINCLKCLKCDLSKTRSNVVFGEGNEKSKIFFIGEGPGEQEDLKAKPFVGRS
GKLLDKMLENINLSRKKNIYIANIVKCRPPENRDPKENEQHACLDWLRNQVLIIKPKIIV
TLGRIASTCLIKPDFKITKEHGKFFKKNNFIIMPTFHPAAILRDPNKKILTEQDFMKLRN
IMDKIQFE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtacatatcttgggaagaattaaaaattaactgcttaaaatgtttaaagtgtgatttg
agtaagaccagaagcaatgttgtttttggcgaaggaaatgagaaatctaaaatatttttt
ataggagaaggtccaggagagcaagaagatttaaaagcaaaaccttttgttggtcgttca
ggtaaattacttgataaaatgctagaaaatataaatttaagtagaaaaaaaaatatttat
atcgcaaatatagttaaatgtagacctccagaaaacagagatccaaaagaaaacgaacaa
catgcttgcttagattggttaagaaatcaagttttaattataaaacctaaaattatagtt
actttaggaagaatagcatctacttgtttaataaaacccgattttaaaattacaaaagaa
catggaaaatttttcaaaaaaaataattttataataatgccaacttttcatcctgctgct
atcttaagagacccaaataaaaaaatacttaccgaacaagattttatgaaattaagaaat
attatggataaaattcagtttgaataa
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