Candidatus Paraimprobicoccus trichonymphae: RsTaC01_0082
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Entry
RsTaC01_0082 CDS
T09783
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
ptrh
Candidatus Paraimprobicoccus trichonymphae
Pathway
ptrh00550
Peptidoglycan biosynthesis
ptrh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptrh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RsTaC01_0082
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptrh01011
]
RsTaC01_0082
Peptidoglycan biosynthesis and degradation proteins [BR:
ptrh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RsTaC01_0082
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Beta-lactamase2
GSDH
Motif
Other DBs
NCBI-ProteinID:
BED92382
UniProt:
A0AA48KYZ5
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All DBs
Position
complement(104446..106668)
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AA seq
740 aa
AA seq
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MTKGTTIRMWRRSIVVLVILVVFGFAMLIYRLINLQILQKDYLQRLALEQQLANTKINAQ
RGTIYDRNMKVLAQSATVWSVALEPAYLNSENKRELVSKNLSEILNLDRETIMKLSKKKS
YHVIIKRKIEDELKDKVLEFKKNNNISDGIKLIEDYKRYYPYGSFLSVVMGFVGNDPKGL
GGLEARYDKTLSGEQGRILTARNARLTDMPYDYEQRIPAKNGNNLVLCIDKNIQHIVEKN
LEEGIKNNKVLNRATAIAIEVNTGEILAMAVKGDFDPNEPFSMTEKSDIEHFNNLLNEEE
KNKFKNQVLQKQWRNKAISDTYYPGSVFKMFVAAMAFELNVVDENTPFFCNGRTKPYDSA
PFIKCHKTSGHGSQTFVKALCNSCNPAFIMTGQKIGAEKFFEFYKSFGFHEKTGIDLPGE
TGDLFFHEDGSMTQMELAVASMGQNFGITPIQMIKGMAAIANGGNLVSPHIVKEITDQYG
NIVQTFNTKIKKAVISKTNSRRVMNMLQENAISGAAKSAYVPGYRIAGKTGTSQKIGLSR
KGHKDYISSFGGIAPADNPKIALLVFFDTPEGDFYYGSAVAAPVFAKIMQETLPYLGIER
KFTQEEIEKFGAETPNLKDKKVSDAKNLITKNNLKFLIIGNGDTVLSQMPEPKNLIPKQG
TIVLYTENLDKNNNKTKVPNFVGITPAQANKLASDCKLNLKILTNDPESNLLISVAQSIP
EKTEVSFGTVVNVNFIAKKN
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaaggtacaactataagaatgtggcgacgttctatcgtggttcttgtgatttta
gtggtttttgggtttgctatgttaatatatagacttattaaccttcaaattttacaaaaa
gactatttacaaagacttgctttagaacagcagttggctaatacaaaaattaatgcccaa
agaggaactatttatgatagaaacatgaaagttttagctcaaagtgctactgtatggtca
gtagctttagaacctgcttatctaaattctgaaaataaaagagaattagtatcgaaaaat
ttaagtgaaattttaaatttagatagagaaacaattatgaaattatctaaaaaaaaatct
tatcatgtaataattaaaaggaaaatagaagatgaattgaaagataaagttttggaattt
aaaaaaaataacaatatttctgatggaatcaaattaatagaggactataaaagatattat
ccatacggatcttttttgtctgtagtcatgggttttgtaggtaatgaccctaaaggttta
ggtgggcttgaagcccgttatgacaagactttaagtggagaacaaggcagaatattaacg
gctagaaatgctcgtttaacagatatgccgtatgattatgaacaaaggattccagctaaa
aatggaaataatctagtattatgtatcgataaaaatattcaacatattgtagaaaaaaat
ttagaagaaggaataaaaaataacaaagtgttaaatcgagcaacagctatagcaattgaa
gtaaatacaggagaaatattagcaatggctgtaaaaggagattttgatccaaatgaacct
tttagcatgactgaaaaatcagatatagagcattttaacaatttgcttaatgaagaggaa
aaaaataagtttaaaaatcaagttttacaaaaacaatggagaaataaagcaataagcgac
acatattatcctggttctgtttttaaaatgtttgtagcggctatggcttttgaattaaat
gtagtagatgaaaatacaccgtttttttgtaatggaagaacaaaaccttatgacagtgcg
ccatttataaaatgtcataaaacatcgggtcatggcagccagacttttgtaaaagctctt
tgtaactcttgtaatcctgcttttattatgactgggcaaaaaataggagcagaaaagttt
tttgaattctataagtcttttggttttcacgaaaaaactggtatagatttgccaggtgaa
acaggagatttgttttttcatgaagatggcagcatgactcaaatggagctagcagttgct
tctatgggacaaaatttcggtattacaccaatacaaatgataaaaggcatggcagctatc
gcaaatggtggaaatttagtttcaccacatattgtaaaagaaattacagatcaatatgga
aatatagtccaaacttttaatacaaaaataaaaaaagctgtcatatccaaaacaaattcc
agaagagtaatgaatatgttacaagaaaatgccatatctggtgccgctaaaagtgcttat
gtaccaggttatagaatcgctggaaaaactggaacttctcaaaaaattggcttaagtcga
aaaggtcataaagattacatttcttcatttggggggattgcaccagctgataaccctaag
atcgctcttttagtgttttttgatactccggaaggagatttttactatggaagtgctgta
gctgcaccagttttcgctaaaattatgcaagaaacacttccatatttaggaatagaaaga
aagtttacacaagaagaaatagaaaaatttggagcagaaaccccaaatttaaaggataaa
aaagtctcagacgccaaaaacttaataactaaaaacaatttaaaatttttaataatcgga
aatggagatactgtattatctcaaatgccagaacctaaaaatttaattccaaaacaagga
actatcgttttatatactgaaaatttagataaaaacaataacaaaacaaaagtcccaaat
tttgtgggaataacacctgctcaagctaataaattagcttctgattgtaaattaaactta
aaaatattgactaatgatccagaaagtaacttacttatctcagttgctcaaagtatacct
gaaaaaacagaagtttcttttggtacagttgtaaatgtaaattttattgctaaaaaaaat
taa
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