Candidatus Paraimprobicoccus trichonymphae: RsTaC01_0271
Help
Entry
RsTaC01_0271 CDS
T09783
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ptrh
Candidatus Paraimprobicoccus trichonymphae
Pathway
ptrh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptrh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RsTaC01_0271
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptrh01007
]
RsTaC01_0271
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptrh03016
]
RsTaC01_0271
03029 Mitochondrial biogenesis [BR:
ptrh03029
]
RsTaC01_0271
Enzymes [BR:
ptrh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
RsTaC01_0271
Amino acid related enzymes [BR:
ptrh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RsTaC01_0271
Transfer RNA biogenesis [BR:
ptrh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RsTaC01_0271
Prokaryotic type
Other AARSs
RsTaC01_0271
Mitochondrial biogenesis [BR:
ptrh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RsTaC01_0271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BED92524
UniProt:
A0AA48HZF3
LinkDB
All DBs
Position
complement(323587..325338)
Genome browser
AA seq
583 aa
AA seq
DB search
MSIKSIYRTCYCGEVSEKNINQEIKVSGWVESIRDHGGVTFLDLRDISGIVQIVVNDFKL
LKNISRESAICLTGFVTKRDEININPKLKTGFWEIKSENLELLGKCKNVLPFEIDSSKET
KEELRLKYRFLDLRNIKVKNNIILRSKILSFLRNKMENLGFIEVQTPILSASSPEGARDY
LIPSRKYKSKFYALPQAPQIFKQLLMVSGFDKYYQIAPCFRDEDSRTDRSPGEFYQLDFE
MSFVTQEDVFKVGEEILYDLFKKFSDKEISERPFKRLTYKETMSKYGTDKPDLRNPLEII
DITEIFESTNCKIFENKVVKSICIENIFNQPRKFFDNMLSFALKIGMSGLGYIKISENLE
FSGPISKFLPKNKKQDLINKTNLKPNSVLFFISDKKENIYNFSSQIRTELAEKLNLINKN
KFEFCYILDYPMYELDEEINKIVFTHNPFSMPQGGLYSLLNENPLDILAYQYDIVCNGIE
LSSGAVRNHDPKIMLKAFEIAGYTEQNIIDKFSALYNSFKYGAPPHAGMAPGIDRIIMLL
TQEENIREVIAFPMSSNAQDLMLNSPSEVSEQQLKEVHIKIRE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaaaagtatttataggacctgctattgcggggaagtttctgaaaaaaatata
aatcaggaaataaaagtatctggttgggttgaaagtataagagatcatggtggtgttact
tttttagatttaagagatatttccggtatagttcaaattgtagttaatgattttaaatta
ctaaaaaatatcagtagggaaagtgctatatgtttgacaggttttgtcactaaaagagac
gaaattaatataaatccaaagttaaaaactggattttgggaaataaaatctgaaaattta
gaattactaggtaaatgtaaaaatgttttgccatttgaaattgatagctctaaagaaact
aaagaagaacttagattaaaatatagatttctggatttgagaaatatcaaagtaaagaat
aacataattttaagatctaaaattttaagttttttaagaaataaaatggaaaatttagga
tttatagaagttcaaactccaattttgtcagcttcttcacctgaaggtgctagggattat
ttaattccaagtagaaaatataagtcaaaattttacgctttaccacaagcaccacaaatt
tttaaacagttattaatggtatcaggatttgataaatattaccaaatcgcaccttgtttt
agagatgaagattcgcgaactgatagatcacctggcgaattttatcagttggattttgaa
atgtcttttgtaactcaagaagatgtgtttaaagtaggggaagaaattttgtatgacttg
tttaaaaaattctcagataaggaaatttcagaaagaccatttaaaagattaacatataag
gaaactatgtctaaatatggaactgataaaccagatttgagaaatccgctagaaataatc
gatataacagaaatttttgaaagcacaaactgtaaaatttttgaaaataaagtagtaaaa
tccatatgtattgaaaatatttttaaccagccgagaaaattttttgataatatgctaagt
tttgctttaaaaattggaatgtctggtcttggatatatcaaaatttctgaaaatttagaa
ttttcaggtcctattagcaaatttttacctaaaaacaaaaaacaagatctaataaataaa
actaatttaaaacctaattctgtattgttttttatttctgataaaaaagaaaatatttat
aatttttcaagtcaaatcaggactgaacttgcagaaaaattgaatttgataaataaaaat
aaatttgagttttgctatattttagattatccaatgtatgaacttgacgaagaaattaat
aaaattgtttttacccacaatcctttttctatgccacaaggaggattatatagtttatta
aatgaaaatcctttagatattttagcttatcagtatgatatagtatgtaatggaatagaa
ctttcctcaggtgctgttagaaatcatgatccaaaaattatgttaaaagcctttgaaata
gctggatacacagaacaaaacataattgataagttttcagctttgtataattcctttaag
tatggggctcctcctcacgctggaatggcaccaggaatagacaggattataatgttgtta
actcaagaagaaaacattcgtgaagttatagcatttccgatgagtagtaatgctcaggat
ttaatgttaaattctccgtctgaagtatcagaacaacaacttaaagaagttcatattaaa
ataagagagtga
DBGET
integrated database retrieval system
