Candidatus Paraimprobicoccus trichonymphae: RsTaC01_0324
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Entry
RsTaC01_0324 CDS
T09783
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ptrh
Candidatus Paraimprobicoccus trichonymphae
Pathway
ptrh03030
DNA replication
ptrh03410
Base excision repair
ptrh03420
Nucleotide excision repair
ptrh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RsTaC01_0324
03410 Base excision repair
RsTaC01_0324
03420 Nucleotide excision repair
RsTaC01_0324
03440 Homologous recombination
RsTaC01_0324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrh03032
]
RsTaC01_0324
03400 DNA repair and recombination proteins [BR:
ptrh03400
]
RsTaC01_0324
Enzymes [BR:
ptrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RsTaC01_0324
DNA replication proteins [BR:
ptrh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RsTaC01_0324
DNA repair and recombination proteins [BR:
ptrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RsTaC01_0324
NER (nucleotide excision repair)
GGR (global genome repair) factors
RsTaC01_0324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
PPIP5K2_N
Motif
Other DBs
NCBI-ProteinID:
BED92557
UniProt:
A0AA48I434
LinkDB
All DBs
Position
380343..382889
Genome browser
AA seq
848 aa
AA seq
DB search
MKKLLIIDSNSIFVRAFYGIKMLSTKSGIFTNAIYGFLKTLKKLRSDINPDIIIFAFDLP
DKTFRHEIFKNYKAQRTGMPNELAKQLPVLKEIINFFGYKIVTYSGYEADDILGTFANLC
KKNLEYYCILASGDTDMLQLVSKKTQVVIYKFKFGKTEVINYNEKKIIEDFGLKPKNLID
VKSLQGDISDNIPGVSGIGQKTALKLIQKFENIENIYENIDNLNISKNIKNKLILGKDLA
FISKKLGRICVDVPIDSNFENYIQSKPDLEKIGKIFEKFEFFSFIKEMNLDDSNENICDF
ELKYVEKLDILLENIKSKINFYFLVNYKENDIEKISVLVDKKVFIIKSSCENFYEFLKKL
LEDENVSKFTYDIKRLKNVLNSRKIYIKNIRCDIMLACYILNPSFSNYELEKIFERYGIL
PKCSNFICYLEKLVNLIFEDLNKNDQLKLLEIEQKFALALSDMENLGFEIDKIKLEKYSE
KLNKILENLVSKIYDFIGIKFNINSPKQLSNILFEKLKLPKNKKNKSNYYSTNSEILKNL
IEIHPIINLILEYKTISKLKSTYCNGILKFLKPDNRIYTIFNQTETKTGRISSLEPNLQN
IPIKSEIGRELRSFFIAKKDFLLIDADYSQIELRILAHLSQDEKMLNLFKENKDIHKITA
SKIFNIDVNLVTKEMRSRAKTVNFAVIYGMSAYSLSQELKITLKEASEYIINYFNFYKDI
CKYFEKTINFAKKNNFVETLFKRRRYVPEIKSSNFNMRTFGERIIKNMPIQGTSADIIKI
AMININKKLKKFKSKIILQVHDEIILESPIEEIEVVKELVNFEMENAVNLSVPLMVNISV
GENWGNYI
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaattattaataattgatagcaatagtatatttgttagggctttttatggtata
aaaatgctttctacaaaatctggaatttttactaatgcaatttacggatttttaaaaacg
ttaaaaaaacttaggtctgacattaaccctgatataataatttttgcgttcgatctacca
gataaaactttcagacatgaaatttttaaaaattataaagctcaaagaacaggtatgccg
aatgaattagctaaacaacttcctgtgcttaaagaaataattaacttttttggctataaa
atagtgacttattcaggatacgaagcagatgatattttgggcacttttgctaatttatgt
aaaaaaaatttagaatattattgtattttagcaagtggcgatacagatatgttgcaattg
gtttccaaaaagactcaagtggtaatttacaaatttaaatttggaaaaactgaagttatt
aattacaatgagaaaaaaataattgaagatttcggtttaaaacctaaaaatctgattgat
gtaaaatccctgcaaggtgatatttccgataatattccaggtgtcagtggcataggccaa
aaaactgctttgaaattaattcaaaaatttgaaaatatcgaaaatatttacgaaaatata
gataatttgaatataagtaaaaatattaaaaataaattaattttaggcaaagacctagct
tttattagtaaaaaattaggaagaatttgtgtagatgttccgatagatagtaattttgaa
aattatattcagagtaaacctgatttagaaaaaataggaaaaatttttgaaaaatttgaa
tttttttcttttattaaagaaatgaatttagatgattcaaatgaaaatatttgtgatttt
gaacttaaatatgtagaaaaacttgatattttactagaaaatataaaatctaaaataaat
ttttattttttagtaaattataaagaaaatgatattgaaaaaataagtgttttggtagat
aaaaaagtatttattattaaaagtagttgtgaaaatttttatgaatttttaaaaaaattg
cttgaagatgaaaatgtttcgaaatttacatatgatataaaaagacttaaaaatgtttta
aatagtcgtaaaatatatataaaaaatattagatgtgatataatgctcgcttgttacatt
ttgaatccttctttttcaaattatgagttagaaaaaatatttgaaagatacgggatttta
cctaaatgttctaattttatatgttatttggaaaaattagtaaatttaatatttgaagat
ttaaacaaaaatgatcaattaaaattactagaaattgaacagaaattcgctttagctcta
tcagacatggaaaatttaggttttgaaattgataaaattaagttagaaaagtattctgaa
aagttaaataaaattcttgaaaatttagtttctaaaatttatgattttattggtattaaa
tttaatataaattctcctaagcaattgagcaatattttatttgaaaaattaaaattgcca
aaaaataagaaaaacaaaagtaattattattcaacaaactcagaaattttgaaaaatttg
atcgaaattcatccgattattaatttaattttagaatataaaactataagcaaattaaag
tctacatattgcaacggaattttgaaatttttaaaaccagacaatagaatttacacaatt
tttaatcaaactgaaactaaaaccggaaggataagttctttggagccaaacctacagaac
attcctataaaatccgaaattggaagagagctgagaagtttttttatagctaaaaaagat
tttttactcatagatgctgactattctcagatagaattaagaattttagcccatctttcg
caagatgaaaaaatgttaaatttatttaaagaaaataaagatatacataaaataacagct
tcaaaaatttttaatattgatgtaaatctagttactaaagaaatgcgatcaagagctaaa
acggtgaattttgcggtaatttatggaatgagtgcatattctttgtcacaggaattaaaa
atcactttgaaagaggcctcagaatatataataaattattttaatttttataaagacata
tgcaaatattttgaaaaaactataaattttgctaaaaaaaataattttgtagaaacttta
tttaaaaggcgcagatacgtgccagaaataaaatcttctaattttaatatgagaactttt
ggagaaagaataattaaaaatatgccaattcaaggcacttcagctgatataattaaaatt
gcgatgataaatataaataaaaaattaaaaaaatttaaatctaaaatcatccttcaagtt
catgatgaaattatactagaatcacctatagaagaaatagaagttgtaaaagaattagta
aattttgaaatggaaaatgctgtaaatttatctgtacctttaatggtaaatatttcagtc
ggcgaaaattggggaaactatatttaa
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