Candidatus Paraimprobicoccus trichonymphae: RsTaC01_0696
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Entry
RsTaC01_0696 CDS
T09783
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ptrh
Candidatus Paraimprobicoccus trichonymphae
Pathway
ptrh00470
D-Amino acid metabolism
ptrh00550
Peptidoglycan biosynthesis
ptrh01100
Metabolic pathways
ptrh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ptrh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RsTaC01_0696
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RsTaC01_0696
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RsTaC01_0696
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptrh01011
]
RsTaC01_0696
Enzymes [BR:
ptrh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RsTaC01_0696
Peptidoglycan biosynthesis and degradation proteins [BR:
ptrh01011
]
Precursor biosynthesis
Amino acid ligase
RsTaC01_0696
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
RimK
ATP-grasp_4
ATP-grasp
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
BED92811
LinkDB
All DBs
Position
773903..774943
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AA seq
346 aa
AA seq
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MIIFGGNSTEHEVSIISASNVIKNISKEKYNLFLVRINKKGEWYLYSGDINNILNKNWEN
DKNNKKVLIFPNVGIVIIEKDSYKTINIDVAFPVLHGKNGEDGTIQGLLKLANIPVVGCE
TASSAVCMDKIFTNSILKFNNINKPDFMWFYYYDFEKNPEKYLNQVEKFPVFIKPANSGS
SIGVNRAYNKQELENFIKIASGYDEKILVENAIIGQEVECSVIGNEDLTASILGEIVTKD
GFYDYDGKYINDTSELIIPARLSEKITNQVKNIVLKSYKILGCKGFARVDLLVEKNSNEI
YLNEINTIPGFTTISMYPKLMNEIGYKMPKLIDNLVDLALKNYKNV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgataatatttggaggaaattcaactgagcatgaagtttcaattatttcagcaagtaat
gtgataaaaaatatatcaaaagaaaagtataatttatttttagtgagaattaataaaaaa
ggcgaatggtatctatactctggagacataaataacattttaaataaaaattgggaaaac
gataaaaacaataaaaaagttcttattttcccaaatgtaggaatagtaataatagaaaaa
gacagttataaaactataaatatagatgtggcttttcctgttttacatggaaaaaacgga
gaagatggtactattcaaggtttgttaaaattggctaatattcctgtagtcgggtgtgaa
actgcttcttcagctgtgtgcatggataaaatttttacaaattcgattttaaaatttaat
aatataaataaacctgattttatgtggttttattattatgattttgaaaaaaatcctgaa
aaatatttaaatcaagtggaaaagttcccggtttttataaaacctgcaaactccggttct
tcaattggggtaaacagggcatataacaaacaggaacttgaaaatttcataaaaatagct
tctggctacgacgaaaaaattttagtagaaaacgccataataggtcaagaagtagaatgt
tctgttattggtaatgaagatttaacagcgtcgattcttggcgagattgtaactaaagat
ggattttacgactatgatgggaaatatataaacgatacttctgaattaataataccagct
agattatccgaaaaaattacaaatcaagtcaaaaacatcgttttaaaatcgtataaaatt
ttaggttgtaaaggttttgcgagagttgatttgctagtagaaaaaaattccaatgaaatt
tacttaaacgaaataaacacaatcccaggttttacaactataagtatgtacccgaaacta
atgaacgaaataggatacaaaatgccaaagctaatagacaacctagtagatttggctttg
aagaattataaaaatgtttaa
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