Candidatus Paraimprobicoccus trichonymphae: RsTaC01_0781
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Entry
RsTaC01_0781 CDS
T09783
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ptrh
Candidatus Paraimprobicoccus trichonymphae
Pathway
ptrh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RsTaC01_0781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrh03400
]
RsTaC01_0781
DNA repair and recombination proteins [BR:
ptrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RsTaC01_0781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_27
Motif
Other DBs
NCBI-ProteinID:
BED92881
UniProt:
A0AA48HWU9
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Position
complement(876948..879362)
Genome browser
AA seq
804 aa
AA seq
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MSGFSPMMQQYLKIKKKYESCIVFFRLGDFYEMFYEDAKTASKELDITLTGKECGQEEKA
PMCGVPYHAYTNYVSKLISKGYKVAICEQIENPLACKGLVKREVTRVITPGTIIEGNLLD
ESKNNFICCVYILNDKCGMCFADISTGELKITETFGSNLFSEVKNELARFSPSEVIYRGD
KKYSGSIKKFVKNRLNSSFGGVLVESYDYKKKLLKYFNNQDLENLNNTVSLETLGGLFSY
LEYTQKDNLKGFSKIDFYTKNQYMKLDLNTIRNLELVETMRNREKRGTLLWVLDKTNTAM
GRRLLRNWIERPLIDLIKINNRQEAVSELVSDMFLRDNLIEGLSKINDVGRILTRLICNS
INCREIKSLGYSISNFKSIKNLLSESNSHILKDIYENIDLFEDICKLIENSIVDEPPVAI
KEGGIIKFGFNKEIDGLKYDMNNSKEIITKMENDERKKTGIPKLKITFNRVFGYCIEVTN
SFLNLVPENYIRKQTLSNSERFVTKELKDLEYRISNAKEKLISLEFEVFEKVRAEIYNYH
KKIEKTVNIIAVLDVLVSLAVVAHKEHYTKPEVNLSDKIILKNSKHPVIEKMLKDDSCPF
VPNDINLDNNLNNINIITGPNMAGKSTYMRQIALNILMAHIGSFVPADCAEIGIVDGIFT
RIGASDDLSSGQSTFMVEMQEVAQIMKNATQKSLLILDEIGRGTSTFDGISIARAVLEYI
SFELKSKTLFSTHYHELTKISEDIKNIKNYSIAIKKNNDDIIFLRKIIPGSIDESFGIET
AKLAKVPSWIINRAKEISKNMKKV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
gtgtctggattttctcctatgatgcaacaatacctaaaaataaaaaaaaagtatgaaagt
tgtatagttttttttaggcttggagacttttatgaaatgttttatgaagatgctaaaacg
gcttctaaagaattagatataactctcactggtaaagagtgcggtcaagaggaaaaagct
cctatgtgtggtgtgccgtatcacgcttatacaaattatgtatctaaactaatttccaaa
ggttataaagttgccatatgcgaacaaattgaaaatccattagcttgtaagggactagtt
aaaagggaagtaactcgcgtaataactcctggtaccataatagaaggtaatttattagat
gaaagcaaaaataattttatttgttgtgtttatattttgaatgacaagtgcggtatgtgc
tttgcggatatttctacaggtgaattaaaaatcactgagacatttgggagcaatttgttc
tctgaagtaaaaaatgaattagccagattttcaccaagtgaagtcatctatagaggagat
aaaaaatactctggaagtattaaaaaatttgttaagaatagattgaattctagttttggc
ggagttttagttgaaagttatgattataaaaaaaagttactaaaatattttaataatcaa
gatttagaaaatttgaacaatactgtatcacttgaaactttagggggattatttagttat
ctagaatatactcaaaaagacaatttaaaaggatttagcaagatagatttttatactaaa
aatcaatatatgaaattagatttaaatactataagaaatttagaactagttgaaactatg
agaaatagagaaaaaagaggcactttattatgggtgcttgataaaacaaatacggctatg
ggtagaagattattaagaaattggatagaaaggccgttgatagatttaattaaaattaat
aatcggcaagaagctgtttctgagttagtttctgatatgtttttaagagacaacttaata
gaaggtctttcaaaaataaatgatgtcggaagaattttgactagactaatttgtaattct
attaactgcagagagataaaatctttaggttatagtatttctaattttaaaagcataaaa
aatttactctctgaaagtaattctcatattttaaaagacatatatgaaaatatagatcta
tttgaagatatttgtaaattaatagaaaattcgatagtagatgaaccgcctgtggctata
aaagaaggtggtataataaaatttggatttaataaggaaattgacggcttaaaatacgat
atgaacaacagtaaagaaataattactaaaatggaaaacgatgaaagaaaaaaaacgggt
attccaaaattaaaaatcacttttaatagagtttttgggtattgtatagaagttacaaat
tcgtttctaaacttagtgcctgaaaattatattagaaaacaaactctttctaatagtgaa
cgttttgtaactaaagaattaaaagatttagaatatagaatttctaacgctaaagaaaaa
ttaatatcacttgaatttgaagtttttgaaaaagtcagagctgaaatttataattaccat
aaaaaaattgaaaaaactgtaaatataatagctgttttagatgttttggtttctttagct
gtagttgctcataaagaacactatactaaacccgaagttaatttaagtgacaaaattatt
ttaaaaaatagcaaacatcctgtaatagagaaaatgttaaaagatgacagctgtccattt
gttcctaatgatataaatttagataataatttaaataatataaatatcataacgggccca
aatatggcaggaaagtctacatatatgaggcaaattgctttgaatattttaatggctcat
attggaagttttgtaccagctgattgtgctgaaattggaatagtagacggaatattcaca
aggataggtgcatcagatgatttatcctcagggcaatcaacttttatggtagaaatgcaa
gaagtagcacaaattatgaaaaatgctacacaaaaaagtttactgattttagacgaaata
ggtagaggaacttcaactttcgacggtataagtatagcgagagccgtgttggaatatatt
tcttttgagttaaaatccaaaacgcttttttcaacacattatcatgaactcaccaaaata
agtgaagatataaaaaacataaagaattacagcattgctattaagaaaaataacgatgat
ataatttttttaagaaaaataattccaggaagtatagatgaaagttttggaatagagaca
gcaaaattagcaaaagtaccgagttggatcataaatagagcaaaggaaatttccaaaaat
atgaaaaaagtgtaa
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