Candidatus Paraimprobicoccus trichonymphae: RsTaC01_1015
Help
Entry
RsTaC01_1015 CDS
T09783
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ptrh
Candidatus Paraimprobicoccus trichonymphae
Brite
KEGG Orthology (KO) [BR:
ptrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrh03032
]
RsTaC01_1015
03036 Chromosome and associated proteins [BR:
ptrh03036
]
RsTaC01_1015
03400 DNA repair and recombination proteins [BR:
ptrh03400
]
RsTaC01_1015
DNA replication proteins [BR:
ptrh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RsTaC01_1015
Chromosome and associated proteins [BR:
ptrh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RsTaC01_1015
DNA repair and recombination proteins [BR:
ptrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RsTaC01_1015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Peptidase_C80
HU-CCDC81_euk_2
DUF4836
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BED93059
UniProt:
A0AA48L072
LinkDB
All DBs
Position
1133187..1133459
Genome browser
AA seq
90 aa
AA seq
DB search
MNKADLVSKIAEKSGLTKKDSESALTSFVEAISEALAQDDKVQIIGFGTFERRKREKRTG
RDPRSGEPIEIPASNIPAFRAGKTFKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcggatttagtttcaaaaatagcagagaagagcggccttactaaaaaggac
tctgaaagtgctttaacaagttttgttgaagcgatttcagaagcacttgcacaagacgat
aaagttcaaataataggttttggcacttttgagcgtcgcaaacgtgaaaaacgaaccgga
agagacccaaggtcaggagaacctatcgaaattccagcttctaatatacccgcttttaga
gcaggtaagactttcaaagatgcagtaaattaa
DBGET
integrated database retrieval system
