Candidatus Paraimprobicoccus trichonymphae: RsTaC01_1071
Help
Entry
RsTaC01_1071 CDS
T09783
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
ptrh
Candidatus Paraimprobicoccus trichonymphae
Brite
KEGG Orthology (KO) [BR:
ptrh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptrh01011
]
RsTaC01_1071
Enzymes [BR:
ptrh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RsTaC01_1071
Peptidoglycan biosynthesis and degradation proteins [BR:
ptrh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RsTaC01_1071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
BED93110
UniProt:
A0AA48ICP7
LinkDB
All DBs
Position
complement(1208655..1209701)
Genome browser
AA seq
348 aa
AA seq
DB search
MISNKRRYVYFFLIILISMILIPLLSKNRGEIVKNLNIKTDVKTFAETGLSFVFHDMETE
KIIHVDIIEAVFRMLAGEMPPNFHPEALKAQSVAILTFFLTHDSSKNLINASKNWVSAVY
RSDKNMKDRWGEKYNENREKLLSAVNEVKGKVLNFNGKPAKTFYYSMSPGCTHNPYGEFR
VENAPYLTNVDSHWDMSLPNFMNKFEITPEQLKNVIENKFPNTKFGKNPKFWVEHVETTE
TELVKSIKVCGCVFTGAEFRFLFDYSKFKSPTFTIKYDEELEKFIVITKGYGHGVGMSQW
GANEMAKEGYTYEKILLHYYPGVEIKNVYELSKFDEIFLKNTNLVVNS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaaacaaaagaagatatgtatacttttttttaataatattaataagtatgatt
ttgataccacttttatctaaaaacaggggagaaattgttaaaaatctaaatattaaaact
gacgttaaaacatttgcggaaacagggctatcttttgtttttcacgatatggaaacagag
aaaattattcatgttgacataatagaagccgtgtttagaatgttagctggagaaatgcct
ccaaatttccaccctgaagctctaaaagcacaatctgttgcgattcttacattttttttg
acacatgactcttcaaaaaatttaataaatgcttcgaaaaattgggtatctgcagtatat
agatcagataaaaacatgaaagatagatggggagaaaaatacaatgaaaatagagaaaaa
ttgttatctgcagtgaatgaagtaaaaggaaaagttttaaattttaacggtaaacctgca
aaaactttttattattctatgtctccgggatgtactcacaatccttacggagaatttcgc
gtagaaaatgcaccttatttaactaatgttgatagccattgggatatgtctttgccgaat
ttcatgaacaaatttgaaattactcctgaacaacttaaaaatgttatagaaaataaattt
cctaacacaaaatttggtaaaaatcctaaattttgggtggaacatgtagaaacaactgaa
actgagttagtaaaaagcattaaagtttgtggctgtgtatttacaggagcggagtttaga
tttttatttgattacagtaaattcaaatctccaacattcacaataaaatatgatgaagaa
cttgaaaaatttattgttattactaaaggttatggccatggagtaggaatgagtcaatgg
ggagcaaatgaaatggcaaaagaggggtatacatatgaaaaaatattacttcattattat
ccaggtgtagaaataaaaaatgtatatgaactttcaaaattcgatgaaatttttttaaaa
aatacaaatttagtagtaaatagttaa
DBGET
integrated database retrieval system
