Paenibacillus tritici: KDC22_00405
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Entry
KDC22_00405 CDS
T07560
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri00750
Vitamin B6 metabolism
ptri01100
Metabolic pathways
ptri01240
Biosynthesis of cofactors
Module
ptri_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
KDC22_00405 (pdxS)
Enzymes [BR:
ptri01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
KDC22_00405 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
IGPS
Dus
NMO
His_biosynth
NanE
DUF188
Motif
Other DBs
NCBI-ProteinID:
QUL55110
LinkDB
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Position
87465..88346
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AA seq
293 aa
AA seq
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METGTSRVKRGMAEMQKGGVIMDVMNAEQAKIAEAAGAVAVMALERVPSDIRAAGGVARM
ADPTIVEEVIKVVSIPVMAKARIGHYVEAKVLESLGVDYLDESEVLTPADEVFHINKREF
TVPFVCGAKDLGEALRRINEGASMIRTKGEPGTGNIVEAVRHMRHINSQIRKVTGLSLDE
LYNEAKTLGVPYELLLEVHQLGKLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKS
DNPEKFARAIVEATTHFTDYKLIAEVSKNLGAPMKGIDIATLTPAERMSERGR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaggaacttcgcgagtcaaaagaggtatggcagaaatgcaaaaaggcggcgtc
attatggacgtcatgaatgcggagcaggcaaaaattgccgaggccgcaggcgcagtagcc
gttatggccctggagcgtgtaccttccgatatccgcgcagcaggcggtgtagcacgtatg
gctgatcctactattgtagaagaggttatcaaggtagtgagcattcctgtgatggctaaa
gcccgcattggccactatgtggaagccaaggtactggaatccctgggtgtggattacctc
gatgagagcgaagttcttactcctgccgatgaagtgttccatatcaacaaacgtgaattc
acagttcctttcgtatgcggagccaaagaccttggagaagctctgcgccggattaacgaa
ggagcctccatgatccgtaccaagggcgagccgggaacgggtaacatcgtcgaagccgtc
cgccatatgcgccacattaacagccagatccgcaaggtgacaggcctctcgctggatgag
ctatataatgaagctaagacgctgggtgttccgtatgagctgctgctggaagttcatcag
cttggcaaattgcctgtcgttaacttcgctgctggtggtgtagctacgcctgcggatgcc
gcgcttatgatgcacctgggtgctgacggcgtgtttgtcggctcgggtatttttaaatcg
gacaatcctgagaagttcgcccgtgccatcgtagaagcgaccacccactttaccgattat
aagctgatcgctgaagtgtccaagaatctgggcgctccgatgaaggggattgatatcgcc
acgctgaccccggctgaacgtatgtcggaacgcggccgttaa
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