Paenibacillus tritici: KDC22_01135
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Entry
KDC22_01135 CDS
T07560
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri00040
Pentose and glucuronate interconversions
ptri01100
Metabolic pathways
ptri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KDC22_01135
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KDC22_01135
Enzymes [BR:
ptri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KDC22_01135
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Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Beta_helix
DUF2807
Motif
Other DBs
NCBI-ProteinID:
QUL55227
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Position
231205..233352
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AA seq
715 aa
AA seq
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MKRTVAKVTSMLLIFSLTLSLIAGGWGSAVVHAAGLTITSSGGGDEAAYVEWSPVNNATG
YNVYVKAASAADSQYQQIHTELIRKYASYWRADAVGLAAGSYVMKVEAVLSGGGTASAVT
GTLGVAPYDRSGFAFSAQSPYGTGSGAYNDNGTLRSGAQVLYITSQNAQTVTLPVVVSSS
GTVQTGVGLGGILTLRQKGYDTTPLAIRIIGKVTAADLSGQLNSSGYLELKGKANYTEMN
ITIEGIGKDAYAYGWGMLLRYTGNVEVRNLGVMLFPDDGISMDTGNANVWVHNNDIFYGS
AGSDADQAKGDGSTDLKKGSTYITLSYNHYFDSGKASLVGLSESAEFFVTFHHNWFDHSD
SRHPRIRVASVHVYNNFYDGVSKYGVGVTTGASAFVEGNVFRNAKYPMLSSLQGTDALGE
GTFSGENGGMIKAYNNSIVGAASIIYANSSAGTAPANATSHDAYLASSRSEPVPGLYKAL
VGGTAYNNFDTTVDTGVNVSAVDSVSTVEQNVTAKAGRLGGGDFSWTFNDSVDDASYAMN
APLMSAIRSYTSGLVSVGGNSSPVGPTPTPSATAVPTATPVPTATPVPTATPAPTATPVP
TATPAVGAAVHNFTASGLASNFFNIQGNLSTSKGTVVYNGLTLTQCLKIESATSIQFTAA
KASTLTLVFNSEGNKIKVDGTSYPITNGIAAISLAAGTHTISKDSTANLYYMVVE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacagttgcaaaggttaccagtatgctgctgatattctcgcttacactatct
ctgatcgccggcggatggggaagtgcagtagtacatgctgcgggtcttacgataaccagc
agcggaggcggagatgaagcggcatatgtggagtggtcacccgtgaacaatgcaacagga
tacaatgtgtacgtcaaggctgcaagtgcagcggactcccagtatcagcagattcatact
gaattgatccgcaagtatgcttcctactggagagcagatgccgtgggacttgcggccgga
agttatgtcatgaaggtggaggccgtattgtcaggcgggggcacggcaagtgcggttacg
gggacgctgggagtagcgccgtatgaccggtcgggatttgctttttcggcccaatcaccc
tatggtacaggctccggcgcttataatgacaatgggacgctccgaagcggggcgcaagtg
ctgtatatcacctctcagaatgcacagaccgtaacgcttcccgtagtagtaagcagttcg
ggtacggtacagaccggggttggacttggcgggattctgacgctgagacaaaaaggctat
gacaccacgccgctggctatccggatcatcggaaaagtgacggctgcggatctgagcgga
cagctgaacagcagcggctatcttgagcttaaaggcaaagcaaattataccgaaatgaat
attacgatcgaaggaatcgggaaggatgcctatgcttatggctgggggatgctgctcaga
tataccgggaatgtagaggtaagaaacctgggcgtgatgttgttccctgacgacggcata
tcaatggatacaggcaatgcgaatgtgtgggtgcataataacgatattttctacggatca
gcagggagtgatgcagaccaggccaagggggacggttctacggacctcaagaagggatca
acgtatatcactctctcctacaaccactactttgattctggaaaagcatccctggtagga
cttagcgagtctgccgaattcttcgtgaccttccaccataactggttcgatcattcggac
tcccgtcatccgcggatccgagtggcctcggtccatgtctacaataacttctatgatgga
gtctccaagtatggggtcggcgttactaccggagcttcggcttttgtggaaggcaatgtg
ttcaggaatgctaaatatcctatgctgagctccctgcaagggacggatgctctgggtgag
ggcacgttctcaggagagaatggcgggatgatcaaagcctataacaatagtattgtgggt
gcggccagtataatctatgccaactccagtgcaggaacagctccggcgaatgcaacttca
catgatgcttacttagcatcgtccagaagtgaacccgttccaggtctgtataaagctcta
gtgggcggaacagcgtataacaacttcgatactactgtagatactggagtgaatgtctct
gcggtggatagcgtaagcacggttgaacagaatgttacggcaaaagccggacgtctgggc
ggcggggacttcagttggacattcaatgattccgtggatgacgcatcctatgcaatgaac
gcgccgttaatgtctgccatccgcagctatacctcggggctggtgtctgtcggaggcaat
tccagcccggtagggccaactccgactccatcggcaacggcagtgccgacggctacacct
gttccaacagcaactccggtgccaacggcaacacctgcgcctacagccacgccagtgcca
acggcaacacctgccgtaggagcagcggttcataactttactgcctctgggctggcgagt
aactttttcaatattcaagggaatctctcaacttcgaaggggactgtggtatataacggc
ctgaccctaacccaatgtctgaaaatcgagagcgccaccagcatccagttcaccgctgcc
aaagcctcaaccttaacgctggtgttcaattcagaagggaacaagatcaaagtcgatggg
acaagctatccgatcacgaatggcattgctgcaatctcgctcgcggctgggacgcatacg
attagtaaggatagtacggctaatttgtattatatggtggtggaataa
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