Paenibacillus tritici: KDC22_05425
Help
Entry
KDC22_05425 CDS
T07560
Name
(GenBank) STM4012 family radical SAM protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri00860
Porphyrin metabolism
ptri01100
Metabolic pathways
ptri01110
Biosynthesis of secondary metabolites
ptri01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KDC22_05425
Enzymes [BR:
ptri01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
KDC22_05425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QUL55987
LinkDB
All DBs
Position
complement(1281987..1283375)
Genome browser
AA seq
462 aa
AA seq
DB search
MTSIRQSLHHTNQDGQPPFSSGELQQWTGQITAHPYRNYLYSYPHKTAYREFASPLSLAE
LWRDEPAESFFLYMHIPFCGARCGFCNLFTLPDKRANVHAEYVDALERQAKQWAAFTRHK
PYARFAIGGGTPSLLAPAQLNRLFSIATDIMGVDLSTTSISVETSPETLTEEKLSILKEH
TVDRVSMGIQSFVAAESAAIYRPQDPEVVYRALELLGQYDFPVLNLDLIYGLPGQTVDSW
LYSLNQALLQEPEEIFIYPLYTREHTIVKPGDLLSQSDIRHDCYQAACALLAAHGYRQYS
MRRFAKEDAGTSKELLDYSCQEEGMVGLGCGARSYTRNVHYASRYGVSRKATESIIADYV
AAERYDTADYGIVLSLAEQKRRFILKAILHSEGLTVADYNRRFGSSLWEDHPELGLLVQS
GFATEEEGILRLTPDGLGYSDSIGDWFISGEIREQMQEFIVP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccatccggcaatctctgcaccacacgaaccaagacggacaacctcccttctct
tcaggggagcttcagcagtggaccgggcagattacggcccatccctaccgcaattatctc
tattcctatccgcacaaaaccgcttaccgcgagttcgcctcccccctctctttagcggag
ctgtggcgggatgagcctgcggagagtttcttcttatatatgcatattcccttctgcggc
gcccgctgcggcttctgcaacctgttcacgctgcccgataaaagagcgaatgtccacgcc
gaatacgtggatgcgctggaacgtcaggcgaagcagtgggccgccttcaccagacacaag
ccttacgcgcgcttcgccatcggcggcggcacaccaagcctgctggcccctgcgcagttg
aaccggctgttcagcatcgccacagatattatgggagtagacctcagcaccacctccatc
tccgtggagacctcgcccgagactctgaccgaggagaagctgtcgattctgaaggagcat
acggtggaccgggtcagcatgggcatccagagcttcgtcgccgccgaatcggctgccatc
taccggccgcaggacccggaggtggtctaccgtgcgctggagctgctgggccaatatgat
tttccggtcctcaatctggatctgatctacggactcccggggcagacggtggattcctgg
ctctattcgctgaatcaggcgctgctgcaggaaccggaggaaatcttcatctacccgctc
tacacccgtgagcataccattgtgaagccgggcgatctgctcagccagagtgatatccgc
catgactgttatcaggctgcatgtgcgctgctggcagcgcatggctaccgccaatattcg
atgcggcggttcgccaaggaggatgcaggaaccagtaaggagcttctcgattacagctgc
caggaggaagggatggtcggcctcggctgcggcgcgcggtcctatacccggaatgtacat
tatgcctcccgctacggcgtcagccgcaaagctacggagagcatcatcgccgattatgtt
gcagctgagcgttacgatacggccgattacggcatcgtgctgagccttgcggagcagaaa
cggcgcttcattctaaaagccatcctgcacagcgaaggactcaccgtggcagattacaac
cggcggtttggatcttcgctgtgggaagatcatcccgagctgggcctgctggtgcagagc
gggttcgctacggaggaagagggcattctgcggctgacaccggatgggctgggatactcc
gattcgatcggggactggttcatctccggtgagatcagggagcagatgcaggagttcatc
gtgccatga
DBGET
integrated database retrieval system
