Paenibacillus tritici: KDC22_09955
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Entry
KDC22_09955 CDS
T07560
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri03030
DNA replication
ptri03430
Mismatch repair
ptri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDC22_09955
03430 Mismatch repair
KDC22_09955
03440 Homologous recombination
KDC22_09955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptri03032
]
KDC22_09955
03400 DNA repair and recombination proteins [BR:
ptri03400
]
KDC22_09955
Enzymes [BR:
ptri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDC22_09955
DNA replication proteins [BR:
ptri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDC22_09955
DNA repair and recombination proteins [BR:
ptri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDC22_09955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DUF655
DUF6282
HROB
Herpeto_peptide
Motif
Other DBs
NCBI-ProteinID:
QUL56771
LinkDB
All DBs
Position
2365962..2369720
Genome browser
AA seq
1252 aa
AA seq
DB search
MSPFVHLHVHSEYSLLDGAARITDLVRRAGEYGMKSLALTDHGVMYGAIPFYKACREQGI
KPIIGCEAYLTAGSRRERGSRKDQPIYHLILLVKNMTGYRNLMKLISIGHLEGQHYKPRI
DMEALAAHAEGIICLSACLGGEVPQHLLHGREDEARKAALRYKEIFGGDFYLELQDHGMP
EQKRVNPKLIALAAECGIPLVATNDVHYMDKEDAEVQDVLICIGTGKSVDDEDRLKIGTD
QLFFKSGEQMASLFPHVPQAIENTQRIAEACNLELTFGQHILPEYSPLPEGLDAAAYLRE
LCRSGLEQRYADTPLWESPEQKETAEKRLDYELGVIESMGFSDYFLIVWDFIAFCHRNGI
VTGPGRGSSAGSLTAYTLKITDVDPLKYNLLFERFLNPERITMPDIDIDFSDERRDEVIA
YVVDKYGKEHVAQIITFGTMAARAAVRDVGRALNLPYNEVDKAAKLIPGQLGISITRALE
STPELKALYESNPKTRGLLDMAMKVEGMPRHASTHAAGVIISKGPLTDAVPLQAGNESTA
LTQYSMEHLESVGLLKMDFLGLRTLSIIERCMNWVKEMTGSVPDFRFIPDHDPLTYEMLG
AGETTGVFQLESAGVRRVLKDLKPSGFEDIVSVVALYRPGPMEFIPKFIGGKHGEFEVVY
PHADLKPILADTYGIIVYQEQIMQIASLMAGFSLGEADLLRRAVSKKKRETLDQERSHFV
EGSLKQGYQEADAHAVYDMIVRFANYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMAAMLT
AVMGNHRKVAEYVLECRRSGIGVLPPDVNESGVLFTPVPDQGSGHIRFGLGAVKNVGTQA
VENIITIRKERPFDSLLDFCRRVDLRVCNKRVIESLLQAGAFDGLPGHRAQLLAMLDETV
DAAVKWRKERDELQIQLFDDLIETPNWEIRYPDIPKFSGTQQLELERELLGLYLSGHPLD
DSAALLEEPGMQKLMDLGEAADESMTVTAGMVVSLKEITTKAGKAMAFVEWEDQIERCEV
VLFPEVWKRSRALIEKGALLALRAKVQQEDEGFKLLAEEVAPLTSDSVRALLQRRSAGGR
PAYGAGRSSPAGAPAAAPAARAGAGGPGARPGGAAGAAAAPGTRTPAAQPPGARADAAAA
QAAPGAPAASAARPDSPAPLRAGQPASAERAASSAESTGRVFIKITPGAELKGLLPRLQA
LLQTHPGPAATLLFYERNQKVLALSDSYRIEPSEELFAAIEGMLGAGTVRIK
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagcccattcgtgcatttgcatgtgcacagcgaatacagtttactggacggggcggcg
cgcattacggatctcgtgcgccgggccggcgaatacggcatgaaatcgctggcgctgacg
gatcatggtgtgatgtacggggccatccctttctataaagcctgccgggagcagggcatc
aagccgattatcggctgtgaagcctatttgaccgcaggctcccgccgtgagcggggaagc
cgcaaggatcagccgatctaccatctgattctgctggtgaagaatatgaccggctacagg
aacctgatgaagctgatctccatcggccatctggagggccagcattacaagccgcggatc
gacatggaggcgctggcagcacacgctgaaggcattatctgcctcagcgcctgtctggga
ggagaggtgccgcagcatctgctgcacgggcgggaggacgaagcgcgcaaggcggcgctg
cggtataaggagatttttggcggagacttctatctggagctgcaggatcacgggatgccg
gagcagaagcgggtgaatccgaagctgatcgcgctggctgccgagtgcgggattccgctg
gtggccaccaatgatgtccactatatggacaaggaggatgccgaggttcaggatgtgctg
atctgcatcggcacaggcaagtctgtggacgatgaggaccgtctgaagatcggcacggat
cagctgttcttcaaaagcggcgagcagatggcttcgctgtttccgcatgtgccgcaggcg
atagagaacacgcagcggattgccgaagcgtgtaatctggagctgaccttcggccagcat
attctcccggaatattcgccgctgccggaagggctggatgccgccgcttatttgcgtgag
ctgtgccgcagcgggctggagcagcgctacgcggacacgccgctctgggagtcaccggag
cagaaggagaccgctgagaagcggcttgactatgagctgggggtcatcgagagcatgggg
ttcagcgattacttcctgattgtctgggatttcatcgctttttgccaccgtaatggcatt
gttaccggtccgggccgtggatcctcggcagggagtcttaccgcttacacgctgaagatt
accgatgtagacccgctgaaatataacctgctgttcgaacgtttccttaatcccgagcgg
attacgatgcccgatattgatattgacttcagcgacgaacgccgcgatgaggtcattgct
tatgtggttgataagtacggcaaggagcatgtggcccagatcatcaccttcggaacgatg
gcggcaagagctgcggtccgggatgtgggccgggcgctgaatctgccctataacgaggtg
gacaaagcggcgaagctgattccgggccagctcggcatcagtattacccgggcgctggag
agtacacctgagctgaaggcgctgtatgagagtaatccgaagaccagaggcctgcttgac
atggcgatgaaggtggaggggatgccgcgacatgcttctacacatgctgccggtgtgatc
atctccaagggcccgctgaccgatgccgttccgcttcaggcgggcaatgagagcacggca
ctgacccagtattccatggagcatctggagagcgtcgggctgcttaagatggacttcctg
ggactgcggactttgtcgattattgaacgctgcatgaactgggtgaaggagatgaccggc
agtgttccggacttccgcttcatcccggatcatgatccgctgacgtatgaaatgctgggg
gcgggtgagaccaccggcgtgttccagctggaatcagcgggtgtccggcgggtgctgaag
gatctgaagccaagcggattcgaggatattgtctcggtggtcgctctgtaccgtccgggc
ccgatggaattcattccgaagttcatcgggggcaagcacggggaattcgaggtggtctat
cctcacgcggatctgaagccgattctggctgatacgtacgggattatcgtctatcaggag
cagatcatgcagattgcttccctgatggccggattctcgctgggcgaagcggacctgctg
cgccgtgcggtatccaagaagaaacgggagacgctcgatcaggagcgcagccatttcgtg
gagggcagtctgaagcagggctatcaggaggcagatgcccatgcggtctatgacatgatt
gtgcggttcgccaactacggcttcccgcgcgctcacgctgccgcctatggggtcctcgct
ttccagaccgcgtatcttaaggcgcattatccggtgcagttcatggccgctatgcttacc
gccgtgatgggtaaccaccgcaaggtggcggagtacgtactggaatgccgccgctccggg
attggcgtgctgccgcctgatgtcaacgagagtggtgtgctgttcacgccggtgccggac
caggggagcgggcatatccgcttcgggctgggagcggtcaagaatgtggggacgcaggct
gtagagaatattataaccatccgcaaggagcggccgttcgacagcctgctcgatttctgc
cgccgggtcgacttacgcgtctgcaacaagcgcgtgatcgaatcgctgctgcaggccggg
gccttcgacgggctgcccggacaccgggcccagctgctggccatgctggatgagaccgtg
gatgctgcggtgaaatggcgcaaggagcgcgatgagctgcagatccagctgttcgatgat
ctgattgagacgccgaactgggagatccgttacccggatatcccgaagttcagcgggact
cagcagcttgaattggagcgcgagctgctgggcctctatctctccggccatccgctggat
gacagtgcggcgctgctcgaggagccggggatgcagaagctgatggatcttggcgaagcg
gcggacgagagtatgacggtgaccgccggtatggtcgtatcgctgaaggagattacgaca
aaagccggcaaggcgatggcctttgtcgaatgggaagatcagatcgagcgctgcgaggtt
gtcctcttcccggaggtgtggaaacgcagccgcgccctgatcgagaagggcgcgctgctg
gccctgcgcgccaaggtgcagcaggaggatgagggcttcaagctgctggccgaggaggtg
gcgccgctcacctcggacagcgtgcgcgcgctgctgcagcgccgcagcgccgggggccgg
cccgcctacggcgcgggccgcagttcccccgcaggagcgcctgcggccgctcctgcagcc
cgtgcgggcgccggtggccccggcgcccggcccggcggtgcagctggcgccgccgctgca
ccgggcacgcgcacaccggcggcacagccgcccggtgcgcgagctgacgcggccgctgcg
caggccgcgcctggggccccggccgcgtcagccgcgcggccggacagccctgccccgctg
cgcgcggggcagccggcttctgctgagcgcgcagcaagctcagcggagagcaccgggcgt
gtcttcatcaagatcacgccgggcgccgagctgaagggtctgctgccgcgccttcaggcg
ctgctgcagacccacccgggacccgcagccacgctgctgttctacgagcgcaaccagaag
gtgctggcgctcagcgacagctaccggatcgagccttcagaggagctgttcgcagccatc
gaaggtatgctgggagccgggaccgtccggatcaagtag
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integrated database retrieval system
