Paenibacillus tritici: KDC22_10670
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Entry
KDC22_10670 CDS
T07560
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDC22_10670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptri03019
]
KDC22_10670
03009 Ribosome biogenesis [BR:
ptri03009
]
KDC22_10670
Enzymes [BR:
ptri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KDC22_10670
Messenger RNA biogenesis [BR:
ptri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KDC22_10670
Ribosome biogenesis [BR:
ptri03009
]
Prokaryotic type
rRNA helicases
KDC22_10670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
AAA_30
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QUL56891
LinkDB
All DBs
Position
2559139..2560590
Genome browser
AA seq
483 aa
AA seq
DB search
MSEVQVQFSDYGLSEEITRALEVLKYVDPTEVQRKVIPVALKARDLIVKSQTGSGKTAAF
AIPLCELADWAENKPQALVLTPTRELAQQVREDITNIGRFKRIKAVALFGKQPFAPQKIE
LTQKTHVVVGTPGRVFDHIERGTLNLSRIQYLVIDEADEMLSMGFIEQIEKIIKQLPKER
VTMLFSATLPDVIKNLCRKYMTEPVDIEIEASGITTASIEHALIEVVQAAKFGLLSDLLT
VENPDSCIIFCRTQEQVNSLFRGMADLEYPVDKIHGGMEQDERFEVMNAFKRGQFRYLIA
TDVAARGIDIENITHVINYDIPLEKESYVHRTGRTARAGKSGKAITFVTPNEHKWVREIE
GYIGFSLPIMKAPSEDAVAYAKPAFDLKLGKQQVRKAGKTEVMNQDIMKLYFNGGKKKKL
RAVDFVGTIAKLEGITAADIGIITIQDNVTYVDILNGKGSLVLQAMKETTVKGKLLKCHI
AKK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagtacaagtacagtttagtgattatggtttgagtgaggagattacccgtgcg
ctcgaggttctgaagtacgtggaccctacggaggtgcagcggaaggtgattccggtggca
ctgaaggcgcgcgatctgatcgtcaagtcgcagaccggcagcggcaaaaccgcagcattc
gccatcccgctctgcgagctggccgattgggcggagaacaaaccccaggcgctggtgctg
acaccgacccgggagcttgcccagcaggtgagagaggatattacgaacatcgggcgcttc
aagcggatcaaggcggtagcgctgttcggcaagcagccttttgccccgcagaagatcgag
ctgacccagaagacgcatgtggttgtaggcacgccgggccgtgtattcgaccatatcgag
cgcgggacgctgaatctgagccggatacaatatctggtaatcgacgaagcggacgagatg
cttagcatgggcttcatcgagcagattgagaagatcatcaagcagctgcccaaggagcgt
gtaacgatgctgttctcggcgacgctgccggatgtgatcaagaatctgtgccggaagtat
atgacggagccggtggacattgagattgaagccagcggaattacgacagcgtcgatcgaa
catgccctgattgaagtcgtacaagctgccaagttcgggctgctcagcgatctgctgacg
gtggagaatccggatagctgcattatcttctgccggacccaggagcaggtgaattccctc
ttccgcgggatggccgacctcgaatatccggtggacaagatccacggcggcatggagcag
gacgagcggtttgaggtgatgaatgcttttaagcggggacaattccgttatctgatcgcc
accgacgttgctgccagagggattgatatcgagaacatcacccatgtcattaactatgat
atcccgctggaaaaagagagctacgtccaccgcaccggccgtaccgcccgtgccggcaaa
agcggcaaagcgatcaccttcgttacgccgaatgaacacaaatgggtcagggagatcgaa
ggctatatcggcttcagcctgccaatcatgaaggctccttcggaggatgcggtggcttat
gccaaaccggcgttcgatctgaagctgggcaagcagcaggtccgcaaagccggcaaaacc
gaggtcatgaaccaggacatcatgaagctctatttcaacggcggcaagaaaaagaagctc
cgcgcagttgatttcgtcggcaccattgccaagcttgagggcattacggcggcggacatc
ggaatcatcacgatccaggataacgtcacctacgtcgatattctgaacggcaagggatca
cttgtgctacaggcgatgaaggagacaaccgtgaagggcaagctgctgaagtgccatatc
gccaaaaaataa
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integrated database retrieval system
