Paenibacillus tritici: KDC22_12605
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Entry
KDC22_12605 CDS
T07560
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri03420
Nucleotide excision repair
ptri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KDC22_12605
03430 Mismatch repair
KDC22_12605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptri03400
]
KDC22_12605
Enzymes [BR:
ptri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KDC22_12605
DNA repair and recombination proteins [BR:
ptri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KDC22_12605
MMR (mismatch excision repair)
Other MMR factors
KDC22_12605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
DEAD
nSTAND1
NACHT
AAA_30
AAA_16
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QUL57226
LinkDB
All DBs
Position
3038204..3040630
Genome browser
AA seq
808 aa
AA seq
DB search
MEKVSSWEQELEWLEQVKEKLKSGIESLEPEVGQLKDQATDIRRRFWEEVTVNTSTEEDF
EESFFTITQQDAVLSERERSHARKLRQWKNMQQLLPSPYFGRIDFHEEGQKAVEQVYIGV
SSFIEEDGLSFVVYDWRTPIASLYYDYPPGKAAFDTPGGRISGTMELKRQYQIRDGQLQH
LFDSSVTIGDELLQQVLGKGADSQMKSIVATIQAEQNAIIRNDTSRMLIVQGAAGSGKTS
AALQRVAYLLYKHRERLTADQIVLFSPNPMFNSYVSTVLPELGEENMQQTTFQEYLETWL
GQDYRIEDSFDQMEYVLTAQQEEGYEARLKGVEYKASEAFLRALQGYAQWLKLEGMLFKD
ICFRDRVLIPGEQIKSKLYSYDRSIRLPNRITLVQKWLLEELTRLQKQEQGAAWVEEEMN
YLDNDQYAEVHGKLHREKGVFDFAEKYLRLQELLVHKREQDEGDFDYAEREEALLGEMIV
KEQFKPLRRGIRKFTFIDMAGLYRQLFSDETAYREMTGEAEVPELWPEICGQTKDKLSGQ
ELFYEDATPYLYLKELIEGVRTNTQVRHIFVDEGQDYSMFQYEFLKKLFPRARMTVLGDF
GQAIFTQATNLYGSSSPLLQLYGEEETSQFLLVRSYRSTYEIVEFTKRLLPGGEAIVAFE
RRGRKPVLAKLGHHELKAGRIVKDLAELQAEGYSSIAVITKTAEEGREAYEILTAGGAAG
LLHITKDTPAFKKGVQVIPAYLAKGVEFDAVLIYDASPQTYHRESERKLFYTACTRAMHR
LQLYTAGEWTPFVNGVDGELYEQTVATL
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtaagcagctgggagcaggagttggagtggctggagcaggtcaaagagaag
ctgaaatcggggatcgaaagcctggagccggaggttggccagctgaaggaccaggccacg
gacatccgccgcagattctgggaagaggttacggtcaatacgagtacggaggaggatttc
gaagagagcttcttcacgattacccagcaggacgccgtcctgtctgaacgggaacgcagt
catgcgcggaagctgcggcaatggaagaatatgcagcagctgctgccgtcgccttatttt
ggccggattgattttcacgaggagggtcagaaggcggtggaacaggtctatatcggagtg
tcttccttcatcgaagaggatggtctgagcttcgtggtctatgactggcggacccccatt
gcgagcctgtactacgactatccgccgggaaaagcagccttcgacacaccgggaggacgg
attagcggaacgatggaactgaagcggcagtaccagatccgtgacggtcagctccagcat
ttgtttgattcgagcgttacaatcggagatgaactactccagcaggtgcttggcaaaggc
gcagattcacaaatgaagagcattgtagctacgattcaggcggagcagaacgcgattatc
cgtaacgataccagccggatgcttattgtgcagggggcggcgggcagcggcaaaacctcg
gcagcgctccagcgcgtagcctatctgctgtacaaacaccgggagcggcttacggcggat
cagattgtattattttcccctaacccgatgttcaacagctatgtgtctaccgtccttccg
gagctgggtgaagagaatatgcagcagacgacctttcaggaatatctggaaacgtggctg
ggtcaggattaccggatagaggattcgttcgatcagatggaatacgtgcttaccgcgcag
caggaagagggttatgaagcccgtctcaagggggtcgaatataaggcgtcggaagccttc
ctccgggcacttcagggttatgcgcagtggctgaagctggaggggatgctgttcaaggac
atctgcttccgggaccgcgtgttaatcccgggggagcagatcaagagcaagctatacagc
tatgatcgttcgattcgtctgcctaaccggattacgctggtgcagaaatggctgctcgaa
gagctgaccagactgcaaaagcaggagcagggagccgcctgggtagaggaagagatgaat
taccttgacaatgaccaatacgctgaagtgcacggtaagctccacagagagaagggcgtg
ttcgacttcgcggagaaataccttcgcctacaggagctgctggtgcataagcgggagcag
gatgaaggggacttcgattacgccgagcgggaggaggcgctgctgggagagatgatcgtg
aaggagcagttcaaaccgctgagacgggggatcaggaagttcacctttatcgacatggcc
gggctctaccgtcaattgttcagtgatgaaacggcctacagggaaatgacaggtgaagcg
gaggtgccggagctatggccggagatctgcgggcagacgaaggataagctgagcgggcag
gaacttttttatgaagatgcgaccccgtatttgtatttaaaagaattgatcgagggtgtg
cggacgaacacgcaggtgcggcatatttttgtggacgaaggccaggattattccatgttc
cagtatgagttcctcaaaaagctgtttccgcgtgcccgcatgacggtgctgggagacttc
ggccaggcgatcttcacgcaggcgacgaatctgtatggaagcagctcaccgctgctacag
ctctatggagaagaagagactagccagttcctgctggtccgcagctaccgctcgacctac
gagattgtggagtttacgaagcggctgctgcccggcggtgaggcaattgtggcttttgag
cggaggggccggaagccggtgttggctaagctgggccatcatgagttgaaggcggggcgc
atcgtgaaagatctcgcggagcttcaggctgaaggttacagctccatcgctgtgattaca
aagacggctgaggagggtagagaagcttatgagattttgactgccggaggggctgccggg
ttgcttcatattaccaaggatactcctgcctttaaaaagggtgtacaggtgattccagcc
tatctcgccaaaggtgtcgaattcgacgccgtgttgatctacgacgcctccccgcagacg
taccacagggagagtgagcgtaagctcttttatacggcttgtacacgggctatgcaccgg
ctacagctgtatacggcaggggaatggacgccgtttgtgaatggggtagacggggagttg
tatgagcagacagtagctacgctatag
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