Paenibacillus tritici: KDC22_13940
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Entry
KDC22_13940 CDS
T07560
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri03420
Nucleotide excision repair
ptri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KDC22_13940
03430 Mismatch repair
KDC22_13940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptri03400
]
KDC22_13940
Enzymes [BR:
ptri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KDC22_13940
DNA repair and recombination proteins [BR:
ptri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KDC22_13940
MMR (mismatch excision repair)
Other MMR factors
KDC22_13940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
PhoH
AAA_30
AAA_16
SLFN-g3_helicase
DEAD
nSTAND3
NACHT
Motif
Other DBs
NCBI-ProteinID:
QUL57474
LinkDB
All DBs
Position
3320278..3322635
Genome browser
AA seq
785 aa
AA seq
DB search
MDKHDHEWQKEQERVNGITRLLSTQIRLLSEELGLHRTDVVDMRKDFWEEVTVNFSSPDD
LGETSTSLRQQAQILNERERHHLQSSKALKKYKKLVVSPYFGRIDFSEPGDEAADKIYLG
IGSLMEDNGTFLIYDWRAPISSLYYDGAPGPAAYETPGGLIKGTMERKRQFVIDNGEIEV
MFDTGVTIGDELLQQVLSHSADDRMKSIVATIQKEQNAVIRNDRSRMLVVQGAAGSGKTS
AALQRVAYLLYKYREVLQADQMLLFSPNPLFNSYVSTVLPELGEENMQQTTFQMYLEHRL
GQEFQLEDVFSQTESLLNAPDGPEASIRREGIAYKSSVVFLGAIRRYVNLLEHEGMLFKP
LMFQGRAVVGKEEMERQFYSYDPGIKLANRIELMTGWLLKRIAAFGVEERSASWVDEQIE
LMDNSDYQRAYNQMRRKGGGHNDSFDDYEAEKILLARYVVSQKLKPLRGWTKRGRFVDVK
GLYSRLFQGREWMKRLDTRQPLPEAWDEICEQTLASISGNELAYEDATPFLYLKELSQGF
RTNTLIRHVIVDEVQDYSPFQLEFMRRLFPRAKMTVLGDLNQAIYAQGEVLGDLAGLVSI
YGEENTEVISLTRSYRSTYEIVEFTRAMIPGGEKIVPFNRRGEEPLLTVVDNEADLLASV
EQDVLNLHAQGYHYVAVICKTAEESAQVHSELEKRLPVRLVTKETPNFQKGTLVLPAYLA
KGVEFDAVIIYDGSAERYGREHERKLFYTACTRAMHLLHIYSLGQPNPFLPAAVRDTVTA
GTSPN
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
ttggataaacatgatcacgagtggcaaaaggagcaggagcgggtaaacggcatcaccaga
ctgctgtctacccaaatccggctgctgtcggaggagcttgggctccaccgcacggatgtc
gtggatatgcgcaaggacttctgggaagaagttacagtgaacttcagcagccccgacgat
ctgggggagacctccacaagtctgcggcagcaggcccagattctgaacgaacgcgaacgc
catcatctgcagtccagcaaagcgctcaaaaaatataaaaagctggtcgtatccccctac
ttcggccggatagacttctcggagccgggggatgaagcggctgacaaaatctatcttggc
atcggttcattgatggaggataacgggaccttcctgatctatgactggcgggcaccgatc
tccagcctgtattatgacggcgcgccgggaccggccgcttatgaaacaccgggcggcctg
attaagggaacaatggagcgcaaacgccaattcgtcatcgacaacggtgaaatcgaagtc
atgttcgacacgggcgtaactatcggcgatgagctgctccagcaggtactgagccatagc
gccgatgaccggatgaagagcatcgtggctaccatccagaaggagcagaacgcggtcatc
cgcaatgacagaagccggatgctggttgtgcagggagccgccggaagcgggaagacttca
gcggcgctgcagcgggtggcctacctgctctacaagtaccgggaggtgcttcaggcagat
cagatgctgcttttctcccccaaccccttgttcaacagctatgtatctaccgtactgcct
gagctgggtgaagagaatatgcagcagacgaccttccagatgtatctggagcaccggctg
ggccaggaatttcagctggaggatgtgttcagccagaccgagagtctgctgaatgccccg
gacggtccggaagcctccatacgcagagaaggtatcgcttataaatcgtcagtggtcttc
ctgggtgccatccggcgttatgtgaacctgctggagcatgaagggatgctgttcaagccg
ctgatgttccagggccgggcggttgtaggcaaggaagagatggaacgccagttctacagc
tatgacccggggatcaagctggcgaaccggatcgagctgatgacgggctggctgctgaag
agaatcgctgcgttcggcgttgaagagcggagtgcttcatgggtagacgagcagattgag
cttatggacaacagcgattatcagcgggcttacaatcagatgcgccgtaagggcggggga
cataacgacagcttcgatgattatgaggcggagaaaatcctgctcgcccgctacgtagtg
agccagaagctgaagccgctgcgcggctggaccaaacgcggacgcttcgttgatgtgaag
ggtctgtacagcaggctgttccagggccgcgaatggatgaagcgtctggatacccgccag
ccgttgcctgaggcgtgggacgagatctgtgaacagacgctggcttccatcagcggcaat
gaattggcgtatgaggatgccacgccgtttctgtatttgaaggagctcagccagggcttc
cggacgaatacgctgatccgtcatgtcattgttgatgaagtgcaggattactcgccgttc
cagcttgaattcatgcgcaggctgttcccgcgggccaagatgacggtgctgggtgatctt
aaccaggcgatctatgcccaaggtgaggtgcttggagacctggcgggacttgtgagcatc
tacggtgaagagaacaccgaggtgatctccctgacccgcagctaccgctcgacttatgag
attgttgaattcacccgggcgatgattcccggaggcgagaagatcgtaccctttaaccgc
aggggcgaggaaccgctcttgacggtagtggataatgaagcagatctgctggcctccgtg
gagcaggatgtgctgaaccttcatgcccagggctaccactatgtagccgtgatttgcaag
acggcggaagagagcgcacaggtgcatagtgaactggagaagcggctgccggtaaggctg
gtcacgaaggagacgcccaatttccaaaaagggacgctggtgcttcccgcatatctggcg
aagggcgtcgagttcgatgctgtgatcatctatgacggctcggcggagagatacggccgt
gaacatgagcgcaagctgttctatacggcttgtacccgggcgatgcatctgctgcatatc
tacagcctgggccagcctaatccgttccttcctgctgcggtgcgtgatactgtaacggca
ggcacatcgccgaactga
DBGET
integrated database retrieval system
