Paenibacillus tritici: KDC22_18530
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Entry
KDC22_18530 CDS
T07560
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDC22_18530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptri03400
]
KDC22_18530
Enzymes [BR:
ptri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
KDC22_18530
DNA repair and recombination proteins [BR:
ptri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KDC22_18530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QUL52451
LinkDB
All DBs
Position
complement(4315479..4316330)
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AA seq
283 aa
AA seq
DB search
MTPKPFIGAHVSIRGGYGQAARSARESGAACFQYFPKNPRSLKLKPVDYRDAGSCADYCR
EQGMVSIAHTPYPTNLAADPSGRAVMAASLRNDLEIAEACGSVGIVVHFGHFAGMEPLQG
YQNIIQCMNDTLADWNGQTKLLIENMAGNHGHEGMTLEELVKVRELSRYPEKIGFCFDTC
HAFAAGTWNPQQTEAFIRRGENLGYWANLDAVHLNDSRYPFGSRRDRHAAIGKGCIGASA
LSQLLKMEPLADKVIVMETEKGPDGTHRAEIAAVRTWFEAGDD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctaagcccttcataggggcacatgtcagcatacgcggcggttacgggcaggct
gcccggtccgccagggagagcggtgcagcatgttttcaatattttccgaagaatccgcgc
agtttgaagctgaagccggtggactaccgcgacgcaggaagctgtgcagactattgccgg
gaacaggggatggtctctattgcccataccccgtatccgaccaatctggctgccgacccg
agcggcagagcggtgatggctgcctccttgcgtaacgatctggagattgcggaggcctgc
ggatcggtgggcattgtggtgcattttggacattttgccggaatggagccgttacagggg
tatcaaaatattatacaatgtatgaacgataccctggctgactggaatggacagacgaag
ctgctgattgagaacatggcaggtaatcatgggcatgaaggcatgacgctggaagaactg
gtcaaggtccgcgagctcagccgctatccggagaagatcggcttctgcttcgatacctgc
catgcgttcgctgccgggacctggaatccgcagcagacggaggcattcattagacgcgga
gagaacctgggctactgggctaatctggatgctgtgcatctgaacgactcccggtatcca
ttcggctcgcggcgggaccgacatgctgcaatcggtaaggggtgtatcggggcatcggcg
cttagtcagcttttgaagatggagcccctggctgataaagtgatcgttatggaaacagaa
aaggggccggatggcacgcacagagcggaaattgctgctgtgaggacctggtttgaggcg
ggggatgattga
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