Paenibacillus tritici: KDC22_18535
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Entry
KDC22_18535 CDS
T07560
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDC22_18535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptri03400
]
KDC22_18535
Enzymes [BR:
ptri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KDC22_18535
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KDC22_18535
DNA repair and recombination proteins [BR:
ptri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KDC22_18535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QUL52452
LinkDB
All DBs
Position
complement(4316320..4317135)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEMENYRKLLSQHLINVPITGVTVNREKTINMETADFVNGLLGARIVFVERRAKHI
LFHLHDGRRLLLHLMLGGLLFYGSEEERPDRTTQVELAFGEHILYFMGLRLGYLHLLSVK
EGEAAMGKLGPELLDRRMTAERFAGILKGRRGALKSLLVNQQVMAGIGNCYADEIAFEAR
LLPSTLVQNLSPEAVNRLYDSIRKVLTEATEIGGYMEMPFMTGDTVTGSYNDACKVYDRE
GEPCLRGGGTIIKTELSGRKVFYCPDCQHDA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccggaaatggagaattacagaaagctgctcagccagcatctaataaat
gtccccattacgggggtaaccgtaaatagagaaaaaaccatcaacatggagactgcggat
ttcgtgaatggcctgctgggcgcaagaattgtgttcgtggaacgccgcgccaagcatatc
ctcttccacctgcatgacggcagaagactgctgcttcatctgatgcttggcggactcctg
ttctatggctcggaggaagagcgtccggaccgcacaactcaggtggagctggctttcggt
gagcatatcctctacttcatggggctgcgcctggggtatctgcatctgctgtccgttaag
gaaggcgaagcggcaatgggtaagctcggccccgaactgctggaccggcggatgactgcc
gaacgtttcgccggaatactcaagggccgccgcggtgcgctgaagagtctgctggtcaat
cagcaggtgatggcaggaatcggcaattgctatgctgacgaaattgcttttgaagcacgg
ctgcttccctccacactcgtccagaacctgtcgccggaagctgtgaaccggctctacgac
agtattcgtaaagtattaacggaagctaccgaaatcggcggttatatggagatgccattc
atgaccggcgatactgtgaccggttcatataatgatgcgtgcaaggtatacgaccgcgaa
ggcgaaccctgcctgcgcggcgggggaacgataatcaagacagagctgtccggacgcaag
gtgttctattgcccggattgccagcatgacgcctaa
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