Paenibacillus tritici: KDC22_19125
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Entry
KDC22_19125 CDS
T07560
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDC22_19125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptri03019
]
KDC22_19125
Enzymes [BR:
ptri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KDC22_19125
Messenger RNA biogenesis [BR:
ptri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KDC22_19125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QUL52558
LinkDB
All DBs
Position
complement(4451054..4452664)
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AA seq
536 aa
AA seq
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MTFNDLNLIPPILKALSLENYTSPTPIQEESIPAALAGRDILGCAQTGTGKTAAFSLPII
QLLSQQARTGGTKRIRSLILTPTRELALQISENIQAYSKFTTIRSTAIVGGVSQKAQERA
LAIGADILIATPGRLIDLMTQKRVDLQHVQILVLDEADRMLDMGFIHDVKRIIAKMPAKK
QTLFFSATMPTEISQLVKTLLVNPVKIEITPVSSTVDRIEQSIYLLENGNKQNQLNRLLQ
DPSIVSALVFTRTKRGADRVTRDLTRINITAQAIHGNKSQNDRQNALRNFKSGATRVLVA
TDIAARGIDIDELSHVINFNLPNIPETYVHRIGRTGRAGMSGIAISLCEAEEIPYLKDIQ
KLIGKTIPEVKDHAYPMSKSNLALLADRPGKAPMKPSQKAKTNPARKPKSEWFAQGKQGG
GYTSGGARSTSGSTYTGGGAKSASGGSDAGGRAKSASGSSYAGGGTGSSRPAGGSGNGAG
SGSRPGERSAARPGGGAGNKPSGGQYGRSSQSGSRPGGSQSGRSGSRPAANASRSQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaacgatttgaatttgattccgccgattcttaaggcactgagcctggaaaac
tatacatccccaaccccaattcaagaagagtccattcctgcggccttggctggcagagat
atcctgggctgtgcacagaccggtaccggaaaaaccgcggccttctcattgccgattatt
caactgctcagccagcaggccagaactggcggaacgaagcgtatccgttccctgattctg
acaccgacgcgggagcttgctctgcaaatatccgagaacattcaagcctacagcaagttc
acaaccattcgctcgacagcgattgttggaggcgtatcacagaaggcccaggaacgggcg
cttgccatcggtgctgatattctgattgctacaccgggcagactgatcgacctgatgacc
caaaaacgcgtagatctgcagcatgtgcagattcttgttctggatgaagcggaccgtatg
ctggacatgggcttcattcatgatgtgaagcggattattgccaagatgcctgccaagaag
cagaccttgttcttctcggcaacgatgccgaccgaaatctctcagctggtgaagactttg
ctggtgaatccggtgaagattgagattaccccggtatcttctactgtggacagaatcgaa
cagtcgatctatctgctggagaacgggaacaagcagaatcagctgaaccgtctgctgcag
gacccgtcgattgtgtcagcactggtcttcacacgcaccaaacgcggcgctgaccgggta
acccgggatttgaccagaatcaatattactgcacaggctattcacggcaacaaatcgcag
aatgaccgccagaatgcattaagaaacttcaagagcggtgcgacacgggtgctggtagct
acagacatcgcggcccgcgggattgatattgatgaactgtcccatgtcatcaacttcaac
ctgccgaatattcccgaaacttatgttcaccgtattggccggaccggccgtgcgggaatg
agcggaatcgccatctcactgtgcgaagcggaggaaatcccgtacctgaaggatattcag
aagctgatcggcaagacgattccggaagtgaaggaccatgcttatccgatgtccaagagc
aatctggcattgcttgcagaccgtcccggcaaagcaccgatgaagccgtcgcaaaaagct
aaaaccaatccggcccgtaagccgaagtcggaatggttcgcgcaaggcaagcagggcggc
ggttatacaagcggcggagctagaagcacctcgggtagcacctatacaggtggcggagcg
aaaagtgcatcaggcggtagtgacgcaggcggcagagccaagagtgcctcgggcagcagc
tatgcaggcggcggaactggcagcagccgtcctgctggcgggtccggcaacggagcaggc
tccggcagccgtccaggcgaacgatctgctgcccgtccaggcggcggagcgggtaataaa
ccgtctggcggccaatacggccggtccagccagtccggcagcagaccgggcggaagccaa
agcggacgctctggcagccgtcccgcggctaatgcaagcagatcgcaataa
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