Paenibacillus tritici: KDC22_19305
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Entry
KDC22_19305 CDS
T07560
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptri
Paenibacillus tritici
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptri03016
]
KDC22_19305 (truB)
Enzymes [BR:
ptri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KDC22_19305 (truB)
Transfer RNA biogenesis [BR:
ptri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KDC22_19305 (truB)
Prokaryotic type
KDC22_19305 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QUL52590
LinkDB
All DBs
Position
complement(4490667..4491581)
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AA seq
304 aa
AA seq
DB search
MSELTGVLAVYKPAGFTSHDVVAKARRILGMKRIGHTGTLDPQVTGVLPLCLGRATRVVE
YIQELPKEYVATLRLGLASDTEDLTGTITESVEEVQVTEAEVLAVLESFQGVISQVPPMY
SAVKVDGKRLYELAREGKTVERKSREVEIYEIDMQTMVWNGNYPDITFRVLCSKGTYIRT
LCVDIGRKLGVPGVMVKLERTMSAGIPATHCLTLEQIAEHKEAGTLEEHLIAADEAISHL
PRHTVAEEKKKAALQGQRLSIRFVAPEVKNSGDFRLYDLQGEFLGIYALEATGAIAPVKV
FAQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacttacaggagttctggccgtatataagccggcagggttcacttcacatgat
gtagtggccaaagcgcggcggattctgggcatgaagcggattggacataccgggacactt
gatccacaggtgaccggagtgcttccgctctgtctgggccgggctactcgggtagtggag
tacatccaggagctgcccaaggaatatgttgctacactgcggctggggctggctagcgat
accgaggatttgaccggaacgatcacggaatccgtcgaggaggttcaggttacagaggcc
gaagtactggcagttctggaatccttccagggtgtgatctctcaggttcctccgatgtat
tccgcagtgaaggtggacggcaaacgtctatacgagctggcccgagaaggcaagaccgtg
gaacgcaagagccgtgaagtggagatttatgagatcgacatgcagactatggtctggaat
ggcaattatccggacatcaccttccgggtactctgctccaaaggtacttatatccgcacg
ctctgcgtggatatcggacgcaaacttggagttcccggcgtgatggtgaagctggagcgg
accatgtcggccggaatcccggccactcattgtctgaccctggagcaaattgccgaacat
aaggaagccggtactctggaggagcatttgattgccgccgacgaggccatttcacatttg
cccagacataccgttgccgaggagaagaagaaggccgctctgcaagggcagcgtctgtcg
atccgttttgtggcacctgaagtgaagaacagcggagatttccggctctatgatctccaa
ggagagttcctgggcatctacgctctggaagctacaggggcaattgcgcctgtcaaggtg
tttgcccaggcctga
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