Paenibacillus tritici: KDC22_19415
Help
Entry
KDC22_19415 CDS
T07560
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ptri
Paenibacillus tritici
Pathway
ptri02020
Two-component system
ptri02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KDC22_19415
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KDC22_19415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptri03021
]
KDC22_19415
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ptri02035
]
KDC22_19415
Transcription machinery [BR:
ptri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KDC22_19415
Bacterial motility proteins [BR:
ptri02035
]
Flagellar system
Flagellar assembly proteins
Stator
KDC22_19415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_38
PhyR_sigma-like
Sigma70_ECF
HTH_23
HTH_16
CtpB_N-like
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
QUL52612
LinkDB
All DBs
Position
complement(4514389..4515177)
Genome browser
AA seq
262 aa
AA seq
DB search
MNERKAAQSETDQLWEQWKEHGNPEAKKKLIESYLHIVDYVSSRLAVGLPKNVSKDDLAS
NGVMGLIDAIEKFDYKRGLQFQTYASWRVRGAILDSLRQSDWVPRSVREKAKKIEDAYQQ
LEQKYLRSVSDDEMSKYLNISETEFQTMLQDVAVMSLCSLEDPIREEESETRMSILVDDK
AKNPDRKVNEFYLRDTLTKGIEKLTVKERTVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGTLEKNRDLLMQND
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgagcgtaaagcagctcagtcggaaacagaccagctttgggaacagtggaaagag
cacggtaatcctgaagccaaaaaaaagctgattgagagctatctccatattgttgattac
gtgtccagccgtctggcagtagggctgcccaaaaatgtctccaaggatgatttggccagc
aacggtgtgatgggactcattgatgccatcgagaaattcgactacaagcgggggcttcag
ttccagacctatgcatcctggcgggtaaggggagcaatccttgattctctgcggcaaagt
gactgggtccccaggtcggtacgcgaaaaagcgaaaaaaatcgaggatgcctaccagcag
ctggagcagaagtatttgagatccgtaagtgacgatgaaatgagcaagtatctgaatatt
tcagaaacggagtttcagactatgctgcaggatgttgcagtcatgtcgctctgctcattg
gaagatcctatacgtgaagaagaatcagagacacggatgtctattttggtagatgacaag
gccaagaatccggaccgtaaagtgaatgagttctatctgcgggatacgttaaccaagggg
atcgagaaattaacagtgaaagaacggaccgttgtgtcccttttatattatgaggattta
tctttaagcgagattgccgaagtgatgtcactatcgccttcgcggatctcacagcttcat
tccaaggctattttgcggctaagaggaacacttgagaagaaccgggaccttctaatgcaa
aatgattaa
DBGET
integrated database retrieval system
