Paenibacillus tritici: KDC22_19595
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Entry
KDC22_19595 CDS
T07560
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptri
Paenibacillus tritici
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptri03032
]
KDC22_19595 (topA)
03400 DNA repair and recombination proteins [BR:
ptri03400
]
KDC22_19595 (topA)
Enzymes [BR:
ptri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KDC22_19595 (topA)
DNA replication proteins [BR:
ptri03032
]
Prokaryotic type
DNA Topoisomerases
KDC22_19595 (topA)
DNA repair and recombination proteins [BR:
ptri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KDC22_19595 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QUL52645
LinkDB
All DBs
Position
complement(4546823..4548919)
Genome browser
AA seq
698 aa
AA seq
DB search
MADALVIVESPSKAKTIGKYLGSKYIVKASMGHIIDLPKSQIGVDVENDFNPKYITIRGK
GSILKELKDASKKVKKVYLAADPDREGEAIAWHLANALNLDNTQECRVVFNEITKQAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIVMDREN
EISEFVPTEYWSITAKLAIRDSEFEAKFHRLNGEKKELGQESDVQEVLEAIKNAAFQVKE
VKEKERQRHPSAPFTTSSLQQEAARKLGFRASKTMSVAQQLYEGVELGKEGTVGLITYMR
TDSTRISVTAQEEAKELIQSKYGEKFIPESPRQYSKKAAGSQDAHEAIRPTSALREPDMV
KEFMSRDQFRLYKLVWERFVSSQMSSALLDTLSVDITAGTAIFRAVGSKVSFPGFMKVYV
EGNDDGTTDEEKFLPQLKAGDDLIKREIEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFMPTELGELIIEQMEEFFPEILDVEFTAHMEGDLDHVEEG
AEDWVKVLAQFYESFEKRLTYAEEEMKEIEIEDEVSDELCEKCGKPMVYKLGRFGKFLAC
SGFPECRNTKPIIKDIGVNCPKCHEGKVVERRSKKGRVFYGCDQYPGCDFVSWDRPSVKP
CPACGSWMIEKRNKQGTKLQCTSCDHTEAVLDNDELAE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcgttggttattgtagaatcaccatcaaaagcaaaaacgattgggaaatat
ctaggcagtaaatatattgtgaaggcatctatggggcatatcatagatttgccaaaaagc
cagatcggcgtagatgtggagaatgattttaatcccaaatatataacgatccgcggcaag
ggttctatattgaaggaacttaaggatgccagtaaaaaagtgaaaaaagtctatctcgca
gctgacccggaccgcgaaggtgaagcgattgcctggcatttggcaaatgcactaaatctg
gacaacacacaggaatgccgcgtggtctttaacgaaattacaaagcaggctgtgaaggat
gccttcaagacgccgcgcaagattaatatggatctggtgaacgcgcagcaggcgcggcgt
atacttgaccggcttgtcggttacaagattagccctttattatggaagaaagtcaaaaaa
ggcctctctgctggacgcgtacaatcggtagcggtcaagatcgtcatggaccgggagaat
gaaatttccgaattcgttcctacagaatactggagtattacggccaagctagcgattcgg
gattctgaattcgaggccaagttccaccggctgaacggcgagaagaaggagttgggccag
gagagcgatgtgcaggaagtgctggaagcgatcaagaacgccgccttccaggtcaaagaa
gtgaaggagaaggagagacaacggcatccttccgctccgtttacgacaagctcactccag
caggaagctgcccgtaagctgggcttccgcgcgtccaagacgatgtctgtcgctcagcag
ctctatgagggggttgagctgggcaaggaaggcactgtcggtttgattacctatatgcgt
acggattccacccgtatctccgttacggcgcaggaggaagctaaggagctgatccagtcc
aaatacggcgagaagttcattcccgagtctccgcgtcaatactccaagaaggcagccggg
tcccaggatgcgcatgaagcgattcgtccgacctccgcgctgcgtgagcctgatatggtc
aaagaattcatgagccgtgaccagttccgtttgtataagctggtatgggagcgttttgtc
tcgagtcagatgtcttccgcactgctggataccttgtcggtagatattacagccggtacg
gcaatcttcagagcggtagggtccaaggtttctttccctggcttcatgaaggtatatgtg
gaaggcaatgatgacggcacgacggatgaagagaaattcctgccgcagcttaaggcaggc
gatgatctgattaagcgtgagatcgagccgaagcagcatttcactcagcccccgccaaga
tatacggaagcccggctggtcaaaacccttgaggaattgggcataggccgtccaagtacg
tatgctccaaccctggaaacgatccagaagcgcggctacgtggcgattgaagagaagaaa
ttcatgccaacggagcttggagagctgatcatagagcagatggaagagttcttcccggaa
attctggatgtggaattcaccgctcacatggaaggggatcttgaccatgtggaggaaggt
gcggaggattgggtgaaggttctggcccagttctatgaatcctttgagaagagacttacg
tatgctgaagaggaaatgaaggaaattgaaattgaagatgaggtttccgatgagctgtgc
gagaaatgcggtaagccgatggtctataagctcggccggttcggcaaattcctggcctgc
tccggattcccggaatgccgcaatacgaagccgattattaaggatatcggtgtaaactgc
ccgaaatgtcatgaaggcaaggttgtagagcggcgcagcaagaaggggcgtgtcttctac
ggctgtgaccagtacccgggctgtgactttgtatcctgggacagaccgtcagtgaagcca
tgtccagcctgcggttcgtggatgatagagaagcgcaacaagcagggaaccaagctgcag
tgcacctcgtgtgatcatacagaggctgtactcgacaatgatgaattagcagaataa
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