Paenibacillus tritici: KDC22_30010
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Entry
KDC22_30010 CDS
T07560
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ptri
Paenibacillus tritici
Pathway
ptri03420
Nucleotide excision repair
ptri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KDC22_30010 (pcrA)
03430 Mismatch repair
KDC22_30010 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptri03400
]
KDC22_30010 (pcrA)
Enzymes [BR:
ptri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KDC22_30010 (pcrA)
DNA repair and recombination proteins [BR:
ptri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KDC22_30010 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KDC22_30010 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
ResIII
DEAD
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QUL54467
LinkDB
All DBs
Position
complement(6959579..6961942)
Genome browser
AA seq
787 aa
AA seq
DB search
MQLVNIQDAVSRLNPPQRQAVEATEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAI
LAITFTNKAAREMQERVSKLVGPEGRDIWVSTFHSMCVRILRKDIERIGFTSNFSILDST
DQLSVIRNCMKDLDIDTKKFEPKAIQAIISTNKNELITPAQYEQKIGDYFEGLVAKVYTK
YQHRLRSNNSLDFDDLIMKTIELFKEQPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRML
AESHHRICVVGDSDQSIYRWRGADISNILNFEEDYPEAKTILLEQNYRSTSNILNAANGV
IALNTGRKPKKLWTDSDEGAKIKVFRGDSEHDEGYFVTGEISKNVKQGQAYQNHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKR
GLGDTTVGKLAAAAASQGVSIFRALQTVDDLGFAGRTRNTLVEFYDMIEALHRMVEFLSV
TELTEKILELSQYRMELQNENTLESRSRLENIDEFLSVTMEFEKNNEDKSLVSFLTDLAL
IADIDSVNDDEERSDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFQDNDELEEERR
LAYVGITRAEKQLFLSCARMRTLFGRTTANAPSRFLEEIPEELKEDTVKESDRFRRGGAE
VGGAYGGRGFGGGSRGNFGSRTAAAGNAPAGGGTASFGSGSSASAVPGAGRVVVTTGGAQ
RTTGGAGAAAEAGGFKAGDKVSHGKWGIGTVVAVKGSGNDTELQIAFPAPVGVKRLLAGF
APITKVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgttaacatacaagacgctgtaagccggctgaatccgccgcagcgtcaggct
gtagaagctactgaaggtccgctgctgattatggctggcgcaggcagcgggaagacccgc
gtgctgactcaccggattgcgtggctgattgccaaccgcaaggcgccgccttgggcgatt
ctggcgattacttttacgaacaaggccgcccgggagatgcaggagcgtgtctccaagctg
gtagggccggagggacgggatatttgggtatccaccttccactccatgtgtgtacggatc
ctgcggaaggatattgagcggatcggcttcacctcgaacttctccattctggactctaca
gaccagttgtctgtcatccgcaattgcatgaaggatctggatatcgacaccaagaagttt
gagccgaaggccattcaggctattattagcacgaacaagaatgagctgatcacaccggcg
caatatgaacagaagatcggggattattttgaaggtctggttgccaaagtatacaccaag
taccagcaccggctgagaagcaataactcgctggatttcgatgaccttattatgaagacc
attgagctgttcaaggaacagcctgaggtgctggatttctatcagaagaagttcaagtat
attcatgttgatgagtatcaggatacgaaccgggcgcagtacatgctctgccggatgctg
gcggagagccaccaccgaatttgtgtcgtcggggatagtgaccagtcgatctaccgctgg
cgcggggcggatatctcgaatattcttaattttgaagaagattacccggaagccaagacc
atcctgctggagcagaattaccgctccacctcgaatattctgaacgccgccaacggcgtc
atcgccctgaacacgggccgcaagccgaagaagctatggaccgattccgacgaaggcgcg
aagatcaaggtcttccgcggggactccgagcatgatgaagggtatttcgtcaccggggag
atcagcaagaacgtgaagcagggccaggcgtaccagaaccatgcgattctgtaccgtacg
aatgcccagtcccgtgtaatagaagagattctgatcaaatccgatatcccttaccagatt
gtcggcgggatcaagttctacgaccgcaaggaaattaaggatctgctggcctatctgcgc
ctgctctccaatcctgatgatgatatcagcctgacgcggattatcaatgttcccaagcgg
gggcttggggatacaaccgttggtaagttagcggccgcagcggcttcccagggagtgtcg
atcttccgggcgctgcagacggtggacgatctgggatttgccggacgtacccgcaatacg
ctggtagagttctatgatatgatcgaagccctgcaccggatggtggaattcctctcggta
acggagctgacggagaagattctggagctgtcccagtaccgtatggagctgcagaatgag
aatacgctggaatcccgttcacgtctggagaacatagacgagttcctgtctgtgacgatg
gagttcgagaagaataatgaagacaagtcgctggtctccttcctgacggatctggcgctg
atcgcggacattgacagcgtgaatgacgacgaagaacgcagcgatgctgtcgtactgatg
acgatgcacagcgcgaaggggctggaattccccacggtcttcatcatcgggatggaagag
ggcgtgttcccgcacagccgtgccttccaggacaatgatgaactggaagaagagcgccgg
ctggcgtatgtgggcattacccgtgcggagaagcagctgttcctcagctgcgcacggatg
cgcacgctgttcgggcggacgaccgcgaatgcgccgtcccgcttcctggaggagattcct
gaagagctgaaggaagatacggtgaaggaatcggaccgcttccggcgcggaggcgcggag
gtaggcggtgcctatggcggccgcggcttcggcggaggcagccgggggaacttcggcagc
cgcaccgctgctgccgggaacgctccggccggcggcgggaccgccagcttcggcagcggc
agttcggcgagcgcggtgcccggcgcgggccgtgtcgtggtgacgaccggcggcgcgcag
cgcacgacgggcggagccggggcggctgcggaggccggcggcttcaaggcgggcgacaag
gtctcccacggcaaatggggcatcggcaccgtggtagccgtgaagggcagcggcaatgat
acggagctgcagatcgccttcccggcgccggtaggtgttaagcggctgctggccggcttt
gcgccgatcaccaaagttgaataa
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integrated database retrieval system
