Pseudomonas triclosanedens: OU419_00240
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Entry
OU419_00240 CDS
T09689
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptrl
Pseudomonas triclosanedens
Pathway
ptrl00061
Fatty acid biosynthesis
ptrl00071
Fatty acid degradation
ptrl01100
Metabolic pathways
ptrl01212
Fatty acid metabolism
ptrl02024
Quorum sensing
ptrl04146
Peroxisome
Module
ptrl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OU419_00240
00071 Fatty acid degradation
OU419_00240
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OU419_00240
09145 Cellular community - prokaryotes
02024 Quorum sensing
OU419_00240
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptrl01004
]
OU419_00240
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrl04147
]
OU419_00240
Enzymes [BR:
ptrl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OU419_00240
Lipid biosynthesis proteins [BR:
ptrl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OU419_00240
Exosome [BR:
ptrl04147
]
Exosomal proteins
Exosomal proteins of breast milk
OU419_00240
Exosomal proteins of breast cancer cells
OU419_00240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WAI49733
LinkDB
All DBs
Position
complement(48532..50163)
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AA seq
543 aa
AA seq
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MPAYQSGYVAREIARHAYQNLHDLLSEASRQFPERHAFSCGDSHLSFAELDRLADAFARY
LRHHAGLQPGDRLALMLPNSLQYPIATFGALKAGVVLVNTNPQYTAGELRHQLADSGATA
ILLLDRLLPLLRAVQADTRVTQVLLTSIDDLENPQYDSESAGCTRFQQALRLGMQAPAVE
TVAGLERLALLQYTGGTTGISKGAMLSHFSLIANVIQTLELFLRPGLLEPATDVRISPLP
LYHIMAFSTNCLSSVGMGLHTVFIRDGRNLDEIIGAMRRYPFTLMSGINTLFVGLMNHPD
FPSIDFSHLKWVTSGGAPLNREVGRRWEALTGAPVREGFGLTEASPVVSTGTLQSPYREG
YVGQALVDTELRIVDEEGNDAAPDQPGELWLRGPQVMQGYWQRPEESAQVLSEDGWLKTG
DIAELDANGMLKIVDRKKDMILVSGFNVFPNEVEDAVMRHPGIRECIAIGVPDERKGEAV
KLFVSLRDTALDPAAIIAHCREHLTGYKVPSFIEVLDELPKTSVGKLLRRQLRDLEIARR
TTV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcctaccagtccggatacgtggcccgcgagatcgcccggcacgcttaccagaac
ctccacgacctgctgagcgaagcctctcgccagtttcccgaacggcacgccttctcctgc
ggcgacagtcacctgagcttcgccgagctggaccgcctggccgatgccttcgcccgctac
ctgcgtcaccacgccggcctgcaaccgggcgaccgcctggcgctgatgctgcccaactcc
ctgcagtaccccatcgccaccttcggcgcgctcaaggccggcgtggtgctggtgaacacc
aacccgcagtacaccgccggcgagcttcgccaccaactcgccgattccggtgcgaccgcg
atcctgctgctcgaccgcctgctgccgctgctacgcgcggtgcaggccgatactcgcgtc
acacaggtcctgctcaccagcatcgatgacctggaaaaccctcagtacgacagcgagagc
gccggctgcacgcgcttccagcaagccctgcgcctgggcatgcaggcaccggcggtggaa
acggtggcgggactggagcgcctggcgctgctgcaatacaccggcggcaccacaggcata
tccaagggcgcgatgctcagccacttcagcctgatcgccaacgtcattcagaccctcgaa
ctgttcctgcgcccgggcctgctggagccggccaccgatgtgcgcatctcgccgctgccg
ctctaccacatcatggccttctccacgaactgcctgtcttccgtgggtatgggcctgcac
acggtattcatccgcgatggccgcaacctcgacgagatcatcggcgcgatgcgccgctat
cccttcaccctgatgagcggaatcaacaccctgttcgtcggcctgatgaaccacccggac
ttcccctccatcgacttcagccacctcaagtgggtgacctccggcggcgcgccgctcaac
cgcgaagttggccgtcgctgggaagccctcaccggcgccccggtacgcgaaggtttcggc
ctgaccgaagcctcgccggttgtatccaccggcaccctgcaaagcccctatcgcgagggc
tatgtcggccaggcgctggtggacaccgagctgcgcatcgtggacgaggaaggcaacgac
gccgctcccgaccagcccggcgagctatggctgcgcggcccgcaagtgatgcagggctac
tggcagcgcccggaggaaagcgcccaggtgctgagcgaggacggctggctgaagaccggc
gacatcgccgagctggacgcaaacggcatgctgaagatcgtcgaccgcaagaaggacatg
atcctggtgtcgggcttcaacgtgttccccaacgaggtggaggacgccgtgatgcgccat
ccgggcattcgcgagtgcatcgccatcggcgtaccggacgagcgcaagggcgaggcggtg
aagctgttcgtcagcctcagggacaccgctctggacccggcggcgatcatcgcccactgc
cgcgaacatctcaccggctacaaggtaccgagcttcatcgaggtgctcgacgaactgccc
aagaccagtgttggcaagctgctgcgccgccagttgcgcgacctggaaatcgcccggagg
accacggtgtga
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