Pseudomonas triclosanedens: OU419_00960
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Entry
OU419_00960 CDS
T09689
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ptrl
Pseudomonas triclosanedens
Pathway
ptrl03030
DNA replication
ptrl03410
Base excision repair
ptrl03420
Nucleotide excision repair
ptrl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OU419_00960 (polA)
03410 Base excision repair
OU419_00960 (polA)
03420 Nucleotide excision repair
OU419_00960 (polA)
03440 Homologous recombination
OU419_00960 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrl03032
]
OU419_00960 (polA)
03400 DNA repair and recombination proteins [BR:
ptrl03400
]
OU419_00960 (polA)
Enzymes [BR:
ptrl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OU419_00960 (polA)
DNA replication proteins [BR:
ptrl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OU419_00960 (polA)
DNA repair and recombination proteins [BR:
ptrl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OU419_00960 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OU419_00960 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WAI49868
LinkDB
All DBs
Position
206272..209013
Genome browser
AA seq
913 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGMPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGPTFRDELFAEYKANRPSMPDELRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
RSATAGRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDPDGVKEKFGVGPELIIDYLALM
GDKVDNIPGVPGVGEKTALGLLVGVGGGLDVLYASLDKVPELPIRGAKGLPAKLEEHRQM
AFLSYELATIKTDVQLDVDLDSLHPGEPQREALIGLYRELEFKNWLDDLLREAKDEGGGD
VEAASVQATAKYDTVLEQAGFDAWLKKLEAAELIAFDTETTSLDPQQAQVVGVSFAVTEG
EAAYVPLAHNYMGVPAQLDRDAVLLALKPLLEDPKKRKVGQHAKYDMNVLANASTPIAVQ
GVAFDTMLESYVLDSTATRHDMDSLALKYLGQSTIRFEDIAGKGAKQLTFDQIAIEQAGP
YAAEDADVTLRLHHALWAKLQAIPSLEKVLTEIEMPLVPVLARIERNGALVDANLLGKQS
VELGEKLVELERKAFELAGEEFNLGSPKQLGAILYEKLGLPILSKTATGQPSTAESVLAE
LAEQDYELPKVIMQYRSLSKLKSTYTDKLPEQINPRTGRIHTSYHQAVAATGRLSSSDPN
LQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLDAFRHDRDVHR
ATAAEVFGVPLEEVTSDQRRSAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYFARY
PGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIGSKNQAMRKAAERTAINAPMQGTAADI
MKRAMVAVDNWLQESGVDARVILQVHDELVLEVREEQLDQVRDAIRPLMSKAAELDVPLV
VEAGVGANWDEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcacctctcgtcctcgtggacggctcgtcctacctgtatcgcgcgttccat
gccctgccgccactgacgacctctaccggcatgcccacaggcgcggtgaagggcgtgctg
aacatgctcaagagcctgcgtaagcagtacccggacagcccgttcgcagtggtcttcgat
gccaaggggccaaccttccgcgatgaactgttcgccgagtacaaggccaatcgcccgtcg
atgccggacgaactgcgggtgcaggtcgagccgctgcacgccagcgtaagggcgctgggc
ctcccgttgctgtgcgtggagggcgtggaggcggacgacgtgatcggtaccttggcccgg
cgcagcgccacggcgggacgtccggtggtgatctcgaccggtgacaaggacatggcgcaa
ctggtcgacgggcacattacgctggtcaacaccatgaccggtagcgtgctcgatcccgat
ggcgtgaaagagaaattcggtgtcggtcctgagctgatcatcgactacctggctctcatg
ggcgacaaggtggacaacattccaggcgtgccgggagttggcgagaagaccgcgctggga
ctgctcgtcggcgtaggcggcggtctcgatgtgctgtacgccagcctggacaaagtgccg
gagctgccgattcgcggcgccaaggggctgccggccaagctggaagaacaccgccagatg
gccttcctctcctacgagctggcgaccatcaagaccgacgtgcaactggacgtcgacctc
gattccctgcatccgggcgagccgcagcgcgaggcgctgatcggcctgtaccgcgagctg
gagttcaagaactggctggatgatctgctgcgcgaggccaaggatgaaggcggcggcgat
gtcgaggccgcttcggtccaggccaccgcgaagtacgacacggtgctggagcaggccggg
ttcgacgcctggctgaagaagctggaggccgccgagctgatcgccttcgacaccgagacc
accagtctcgacccgcaacaggcgcaggtggttggcgtttcctttgcggtaaccgaaggt
gaggccgcctacgtgccgctggcgcacaactacatgggcgtgcccgcgcaactcgaccgc
gatgccgtgcttctggcgctcaagccgctgctggaggacccgaagaagcgcaaggtcggc
cagcacgccaagtacgacatgaatgtcctggccaatgcctcgacgcccatcgctgtccag
ggagtcgccttcgataccatgctggagtcctacgtgctggactccaccgcgacccgtcac
gacatggacagcctggcgctgaagtacctcggccagagtaccatccgtttcgaggacatc
gccgggaagggggccaagcaactgaccttcgaccagatcgccatcgagcaggccggtccc
tacgccgccgaggatgctgacgtgaccctgcgcctgcaccacgcgctgtgggcgaagctg
caggccatcccgtcgctggagaaggtcctgaccgagatcgagatgccgttggtgccggtg
ctggcgcgcatcgagcgcaatggcgcgctggtcgacgccaacctgctcggcaagcagagc
gtcgagctgggcgagaagctggtcgaactggagcgcaaggcgttcgagcttgccggcgaa
gagttcaacctaggctcgcccaagcaactgggtgccatcctctatgaaaagctgggcctg
ccgattctgtcgaagaccgctaccggccagccgtccaccgccgagagcgttctcgccgag
ctggccgagcaggactacgaactgcccaaggtcatcatgcagtaccgctcgctgagtaag
ctcaagagcacctataccgacaagctgccggagcagatcaaccctcgtaccgggcgcatc
cacaccagctaccaccaggcggtggcggctaccggccggctgtcctccagtgacccgaat
ctgcagaacatcccgatccgcaccgccgagggccgtcgcattcgccaggcgttcgtcgca
cccaagggctacaagctgctagcggcggactattcgcagatcgagctgcgcatcatggcg
cacctggccaaggacgaaggtttgctcgatgccttccgccatgatcgcgacgtgcaccgc
gccaccgccgccgaagtgttcggcgtgccgctggaggaagtgacttcagaccagcgccgc
agcgccaaggccatcaacttcggcttgatctacggtatgagcgccttcggcctggccaag
cagatcggcgtcgagcgcaaggaggcccaggcttacatcgaccgctatttcgcccgctac
cctggtgtcctggcttacatggagcgcacccgcgcccaagccgccgagcagggcttcgtc
gaaacgctgttcggtcgccgcctgtacctgccggaaatcggctcgaagaaccaggccatg
cgcaaggcggcggagcgtacggcgatcaacgcgccgatgcagggcactgccgcggacatc
atgaagcgcgcgatggtggctgtggataactggctgcaggagagcggggtcgatgcgcgc
gtcatcctgcaggtacacgacgaactggtgctggaggttcgcgaggaacagctcgatcag
gtccgcgatgccattcggccgctgatgagcaaggctgcggaactggacgttccactcgtc
gtcgaagccggagtgggtgcgaactgggacgaggcacactga
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