Pseudomonas triclosanedens: OU419_01265
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Entry
OU419_01265 CDS
T09689
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ptrl
Pseudomonas triclosanedens
Pathway
ptrl02020
Two-component system
ptrl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OU419_01265
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OU419_01265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ptrl02022
]
OU419_01265
02035 Bacterial motility proteins [BR:
ptrl02035
]
OU419_01265
Two-component system [BR:
ptrl02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
OU419_01265
Bacterial motility proteins [BR:
ptrl02035
]
Flagellar system
Flagellar assembly proteins
Others
OU419_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_16
HTH_1
AAA_2
MCM
AAA_3
HTH_30
AAA_7
AAA_22
T2SSE
AAA_19
Parvo_NS1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WAI52603
LinkDB
All DBs
Position
complement(263498..264877)
Genome browser
AA seq
459 aa
AA seq
DB search
MDQLCETVLEERPAQKKIAIIGPSSDPAHAPLLQALLGEGCRVERFAGFTELLRSRSDAG
LLFVIASAFDAADLYTQVGVLLRDGSERDVVPIVGYDEQDKAATLLELGCVDYLLSPFGA
GQLAALLRRQESACAAQDLFVSRSQAGRRLLAMAQRVAQTRAPILITGETGTGKELLARY
IHGIASPQAPFVAVNCAAIPEAMLESILFGHERGAFTGAVSAQPGKFELANGGTLLLDEI
GELPLALQAKLLRVLQEQRVERLGGRREIELNVRIIAATNRDLQAEVAEGRFRADLMFRL
DVLPLHISPLRERKEDVLPLARRFIRQYAPQDAEHDLLTEAASRALLQHDWPGNVRELEN
TLQRALVLRNGLFIQPRDLGLAAPEVPPATVAAVLPLATEGGRAALRASGKLAEYQHVID
TIRRFGGHKTKAAESLGMTTRALRYRLNAMREQGVQVQF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atcgaccaattatgtgagacggtgctcgaagagcggcctgcgcagaaaaaaattgcgatc
atcggcccctcctccgaccccgcccacgctcccctgttgcaagcactgctcggcgaaggt
tgccgggtcgagcgcttcgccggcttcaccgagctgctccgctcgcgcagcgacgccggg
ctgctgttcgtgatcgccagcgccttcgacgcagccgatctctatacccaggttggcgtc
ctgctgcgcgacggcagcgaacgcgatgtcgtgcccatcgtcggctacgacgaacaggac
aaggcagccaccctgctcgaactcggttgcgtcgattacctgctttcccccttcggcgcc
ggccaactggccgcattgctgcgccgccaggaatccgcctgcgccgcccaggacctgttc
gtctcgcgctcccaggcaggccgccgtctgctggcgatggcccagcgcgtggcgcagacc
cgcgcaccgatcctgatcaccggcgagaccggcaccggcaaggaactgctggcccgctac
atccacggcatcgccagcccgcaggcgcccttcgtcgcagtgaactgcgcagcgatcccc
gaggcgatgctcgaatccattctcttcggccacgaacgcggcgccttcaccggcgcagtg
agcgcccagccgggcaagttcgaactggccaacggcggcaccctgctgctcgacgaaatc
ggcgaactgccgctggcgctgcaggccaagctcctgcgcgtgctgcaggaacagcgcgtg
gagcgcctcggcgggcgccgcgagatcgaactcaacgtgcgcatcatcgccgccaccaac
cgcgacctgcaggctgaagtcgccgaaggccggttccgcgccgacctgatgttccgtctc
gacgtgctgccgctgcatatctcgccgctgcgcgaacgcaaggaagacgtgctgccgctg
gcgcgccgcttcatccgccagtacgccccgcaggacgccgaacacgacctgctcaccgaa
gccgccagccgcgcgctgctgcaacacgactggccgggcaacgtgcgcgagctggaaaac
accctgcaacgcgccctggtgctgcgcaacggcctgttcatccagccgcgcgaccttggc
ctggccgctcccgaagtgccgccggccacagtcgccgccgtactgcccctggctaccgaa
ggcggacgtgccgcgctgcgcgccagcggcaagcttgccgagtaccagcacgtcatcgac
accattcgccgcttcggcgggcacaagaccaaggccgccgaaagcctcggcatgaccact
cgcgcactgcgctaccggctcaacgcgatgcgcgagcagggcgtgcaggtgcagttctga
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