KEGG   Pseudomonas triclosanedens: OU419_02620
Entry
OU419_02620       CDS       T09689                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptrl  Pseudomonas triclosanedens
Pathway
ptrl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ptrl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    OU419_02620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptrl03021]
    OU419_02620
Transcription machinery [BR:ptrl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     OU419_02620
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 PhyR_sigma-like Rv2175c_wHTH HTH_17 MerR Sigma70_r3 HTH_11 HTH_24 FaeA T2SS_GspM_XcpZ HTH_28 HTH_29 HTH_31 Phage_terminase
Other DBs
NCBI-ProteinID: WAI50182
UniProt: A0ABY6ZZZ8
LinkDB
Position
complement(562156..562674)
AA seq 172 aa
MSAVQIGNGERVGALYRDHRDWLTAWLNRSLGCPQRAEDLSQDTFVRVLGRRELPSLREP
RAFLVTIARGLLVDHWRRLALEQAYLEELQLMPEAVQPSAQEHCLILADLREIDRLLGSL
SARARSAFLLNRLDGLGHAEIAEHLGVSVSRVRQYIAQGLRQCYIALYGTPT
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgtcggccgtccagataggcaatggcgaacgcgtgggtgcgctgtaccgcgatcatcgc
gactggctgaccgcctggctcaaccgcagcctgggctgccctcaacgcgccgaagacctg
agccaggacaccttcgtccgcgtgcttggccgccgcgaactaccctccctgcgcgagccg
cgcgccttcctggtgaccatcgcccgcggccttctggtcgaccactggcgccggctggcg
ctggagcaggcgtacctggaagagctgcaactgatgcccgaagccgtgcaaccttcggcg
caagagcactgcctgatccttgccgacctgcgggaaatcgaccgcctgctcggcagcctg
tctgcccgcgcgcgcagcgccttcctgctcaaccgcctggatggactgggccatgccgag
attgccgagcacctcggggtttccgtttcccgcgtgcgccagtacatcgcccagggcctg
cgccagtgctatatcgcgctgtacggaacgccgacgtga

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