| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
ptrl Pseudomonas triclosanedens
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ptrl00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OU419_03300 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ptrl03021]
OU419_03300 (rpoC)
03400 DNA repair and recombination proteins [BR:ptrl03400]
OU419_03300 (rpoC)
Enzymes [BR:ptrl01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OU419_03300 (rpoC)
Transcription machinery [BR:ptrl03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OU419_03300 (rpoC)
DNA repair and recombination proteins [BR:ptrl03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OU419_03300 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
701100..705299
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| AA seq |
1399 aa
MKDLLNLLKNQGQIEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVRELLNAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNHPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIFGKLEGRGMATTIKAAKKMVERELPEVWDVLAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVMGLYYMTREAINAKGEGMAFADLQEVDRAYRSG
QVSLHARVKVRINEKVKGEDGQLTANTRIVDTTVGRALLFQVVPAGLPFDVVNQSMKKKA
ISKLINHCYRVVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIIDAATEE
VKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVTDREGKQVDQESFN
SMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTEHGLVMSPHIEGGDVVEPLGERVL
GRVIARDVFKPGSDDVIVEAGTLIDEKWVDFLEQMSVDEVVVRSPITCETRHGICAMCYG
RDLARGHRVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADNVQVKNGGTIRL
HNLKYVERADGALVAVSRSGELAVADDFGRERERYKLPYGAVISVKEGDKVDPGAIVAKW
DPHTHPIVTEMDGTVAFVGMEEGITIKRQTDELTGLTNIEVMDPKDRPAAGKDIRPAVKL
IDAAGKDLLLPGTDVPAQYFLPANALVNLNDGAKVRIGDVIARIPQETSKTRDITGGLPR
VADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPTDGSEPYEELIPKWRHLNVFE
GEQVSRGEVISDGPSNPHDILRLLGVSSLAKYIVNEIQDVYRLQGVKINDKHIETILRQM
LRKVEVAESGDSSFIKGDQVELVQVLEENEVLATQDKFPAKYERVLLGITKASLSTESFI
SAASFQETTRVLTEAAVTGKRDFLRGLKENVVVGRLIPAGTGLAYHSERKRQRDLGKPQR
VSASEAEAALAEALNLSGN |
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| NT seq |
4200 nt +upstreamnt +downstreamnt
ttgaaagacttgcttaatctgttgaaaaaccagggtcagatcgaagagttcgatgccatc
cgtattggcctggcctcgcccgagatgatccgttcctggtccttcggcgaagtcaagaag
ccggagaccatcaactaccgcaccttcaagccggagcgcgatggcctgttctgcgccaag
atctttggcccggtgaaggactatgagtgcctgtgcggtaagtacaagcgcctcaagcac
cgcggtgtgatctgcgagaagtgcggcgtggaagtcgcgctggccaaggtgcgccgcgag
cgcatgggccacatcgagctggcctcgccggtcgcccatatctggttcctgaagtccctg
ccgtcccgtatcggcctgctgctggacatgaccctgcgtgacatcgagcgtgtgctctat
ttcgagagctacgtggtgatcgatccgggcatgaccaccctggaaaagggccaactgctg
aacgacgagcagtacttcgaagccctcgaagagttcggtgacgactttgacgcccgcatg
ggtgcggaggccgttcgcgagctgctcaacgctatcgatctggagcacgagatcggccgc
ctgcgcgaagagattccgcagaccaactcggaaaccaagatcaagaagctgtccaagcgc
ctgaagctgatggaagccttccagggctccggcaaccatcccgagtggatggtgctgacc
gtcctgccggtgctgccgccggacctgcgtccgctggttccgctggatggcggccgcttc
gcgacctcggatctgaacgatctgtatcgccgcgtgatcaaccgtaacaaccgtctgaag
cgcctgctcgacctggccgctccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaagccgtcgacgccctgctggataacggccgtcgcggccgtgccatcaccggttcgaac
aagcgcccgctgaagtccctggccgatatgatcaagggcaagcagggtcgcttccgtcag
aacctgctcggcaagcgcgtggactactccggccgttcggtaattaccgtaggtccgacc
ctgcgtctgcaccagtgcggcctgccgaagaaaatggccctggagctgttcaagccgttc
atcttcggcaagctggaaggtcgtggcatggccaccaccatcaaggctgccaagaagatg
gtcgagcgcgagctgccggaggtgtgggacgttctcgccgaagtcatccgcgagcacccc
gtactgctgaaccgtgcaccgaccctgcaccgtctgggcatccaggcgttcgagccggta
ctgatcgaaggtaaagccatccagctgcacccgctggtctgcgccgcgtacaacgccgac
ttcgacggtgaccagatggccgtgcacgttccgctgaccctcgaggctcagctggaagcg
cgcgcgctgatgatgtccaccaacaacatcctctcgcccgccaacggcgagccgatcatc
gttccttcgcaggacgtggtaatgggtctgtactacatgacccgtgaagcgatcaacgcg
aagggcgagggcatggcattcgccgacctgcaggaagttgaccgcgcctaccgcagcggc
caggtgtccctgcacgcccgtgtgaaagtgcgcatcaacgagaaggtcaagggcgaagac
ggtcagctgaccgccaatacccgtatcgtcgacaccaccgttggccgtgcgctgctgttc
caggttgttccggccggcctgcccttcgacgtggtcaaccagtcgatgaagaagaaggcg
atctccaagctgatcaaccattgctaccgcgtggtgggtctgaaggacaccgtcatcttc
gctgaccagctgatgtacaccggcttcgcctactcgaccatctccggtgtgtcgatcggc
gtgaacgacttcgtcatcccggacgaaaaggcccgcatcatcgatgctgccaccgaggaa
gtgaaagagatcgagagccagtacgcctccggcctggtaacccagggcgagaagtacaac
aaggtgatcgacctctggtccaaggccaacgacgaagtgtccaaggcgatgatggccaac
ctctcgaaagagaaggtgaccgatcgcgagggcaagcaggtcgaccaggagtccttcaac
tccatgtacatgatggcggactccggtgcgcggggttccgcggcccagatccgtcagctg
gccggcatgcgtggcctgatggccaagccggacggctccatcatcgagaccccgatcacc
gcgaacttccgtgaaggcctgaacgtactccagtacttcatctccactcacggtgctcgt
aaaggtctggcggataccgcactgaagaccgcgaactccggttacctgacccgtcgtctc
gtcgacgtggcccaggacctggtggtaaccgagattgactgcggcaccgaacatggcctg
gtcatgtccccgcacatcgaaggcggcgacgtggtggagccgctgggtgagcgtgtgctt
ggccgtgtgattgctcgcgacgtattcaagccgggcagcgacgacgtcatcgtcgaggct
ggcaccctgatcgacgagaagtgggtggacttcctcgagcagatgagcgtcgatgaagtt
gtggttcgttcgccgatcacctgtgaaacccgccatggcatctgtgccatgtgctatggc
cgtgatctggcccgtggtcatcgcgtgaatatcggtgaggctgtcggcgttatcgctgcc
cagtcgatcggcgagccgggtacccagttgaccatgcgtaccttccacattggtggtgcg
gccagccgtacctctgctgcggataacgtgcaggtcaagaacggcggtaccatccgcctg
cacaacctgaagtacgtagagcgtgccgacggtgccctggtagcggtttcccgttccggt
gagctggcggtagccgatgacttcggtcgtgagcgcgagcgctacaagctgccgtacggt
gcggtcatttccgtgaaggaaggtgacaaggtcgatccgggtgccatcgtcgccaagtgg
gacccgcacacccacccgatcgttaccgagatggacggtaccgtggccttcgtgggcatg
gaagagggcatcaccatcaagcgccagaccgacgaactgaccggtctgaccaacatcgag
gtgatggatccgaaggatcgtccggctgccggcaaggacatccgtccggccgtgaagctg
atcgacgccgcaggcaaggatctgctgctgccgggtacagacgtgccggcccagtacttc
ctgccggcgaatgcactggtcaacctcaacgatggcgcgaaagtgcgcatcggtgacgtt
atcgcgcgtatcccgcaggaaacctcgaagacccgcgacatcaccggtggtctgccgcgc
gttgccgacctgttcgaagctcgtcgtccgaaagagccttcgatcctggcggaaatcagc
ggcaccatctccttcggtaaggaaaccaagggcaagcgccgtctggtcatcactcctacc
gacggtagcgagccgtacgaggagctgattccgaagtggcgtcacctgaacgtgttcgaa
ggtgagcaggtaagtcgtggtgaagtgatctccgacggtccgagcaacccgcacgacatc
cttcgtctgttgggcgtcagctcgctggccaagtacatcgtcaacgagatccaggacgtt
taccgtctgcagggcgtgaagatcaacgacaagcacatcgagaccatcctgcgtcagatg
ttgcgcaaggtcgaagtcgccgagtcgggtgattcctccttcatcaagggcgatcaggtc
gagctggtgcaggtgctggaagagaacgaagtgctggctacccaggacaaattccctgcc
aagtatgagcgcgttctgcttggtatcaccaaggcctcgctgtccaccgagtcgtttatt
tcggcggcatccttccaggaaaccacccgcgtcctcaccgaggcggcggttaccggcaag
cgcgacttcctgcgcggcctgaaggaaaacgtcgtcgtaggtcgcttgatcccggcaggt
accggcttggcctaccacagcgagcgcaagcgtcagcgcgatctcggcaagccgcagcgc
gtcagcgcgagcgaagccgaagctgcattggctgaagcgctcaacctgagcggtaactaa |
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