Pseudomonas triclosanedens: OU419_04405
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Entry
OU419_04405 CDS
T09689
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ptrl
Pseudomonas triclosanedens
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptrl03000
]
OU419_04405
Transcription factors [BR:
ptrl03000
]
Prokaryotic type
Helix-turn-helix
Other families
OU419_04405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
PAS_4
PAS_9
AAA_5
Diguanyl_cycl_sensor
PAS_8
HTH_30
PAS
HTH_23
HTH_7
AAA_2
HTH_28
Mg_chelatase
AAA
HVO_A0261_N
HTH_17
HTH_22
HTH_32
PAS_7
Mga
HTH_AraC
HTH_50
IclR_C
HTH_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WAI50518
UniProt:
A0ABY7A0D0
LinkDB
All DBs
Position
923367..925283
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AA seq
638 aa
AA seq
DB search
MRANDMSRHARQVMTVAEGRVRAGAPGADPSIARSWLRCLEQYHLDPAQNRAPTVLEHAC
MLERREHLRQVLEIASGEMNSLHQQLSGAGHAVLLTDSRGIILNCVSEDAERRTFEQAGL
WLGADWSEAHEGTNGIGTCLVERQALTIHQDEHFRSRHTGLTCSASPVFDPQGELLAVLD
VSSARREVSRQSQFHTMALVNLSAKTIEGCYFLRHFEDQWLLRFHLQPDGLGLFSEGMLA
FDGSGRILAANQSAINLLGSHRESLVGRSLEQFFDCHLDDLLGRADPRPNAGWPLRTHSG
RVLYALLRGERPVAAAPVLPRAPLAAGLCIADQRLAHDFRRALKVYAHDVPLLLQGETGT
GKEAFARAVHQGGERAGKAFVALNCAAIPESLIESELFGYRGGSFTGARKEGMRGKLQQA
DGGTLFLDEIGDMPLALQTRLLRVLEERQVVPIGGEPQEVDIRLISASHRDLEALVAAGQ
FREDLYYRLNGLVVALPPLREREDRGALLDHLLADESKGRLVRLDEDVRRHLLDYSWPGN
VRQLRNVLRTLCALCEGGRIQMADLPPDLRRALAPAATPAVMAEEGGDTLGVAERNALLE
VLEAQRWHISRTAQQLGISRNTLYRKLNRHGLSRKSLS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccaacgatatgagccgccacgcccgccaggtcatgaccgtggccgagggcagg
gttcgcgccggagcgccgggtgccgatccttcgattgcccgctcctggctgcgttgcctg
gagcagtaccatctcgatcccgcgcagaaccgcgcgccgacggtcctggagcatgcctgc
atgctggagcgccgcgagcacctgcggcaggtgctggagatcgccagcggcgagatgaac
agcctgcaccagcagctttccggcgccggccatgcggtgctgctcaccgactcgcgcggg
atcatcctcaactgcgtcagcgaagacgccgaacggcgcaccttcgagcaggccgggctg
tggctcggcgcggactggagcgaggcgcacgaaggcaccaacggcatcggcacctgcctg
gtcgagcgccaggcactgaccatccaccaggacgaacacttccgcagccgccataccggc
ctgacctgctcggccagcccggtgttcgacccgcagggcgaactgctcgcggtgctcgac
gtttcctccgcacgccgcgaggtttcgcggcaaagccagttccacacgatggcgctggtg
aacctttcggccaagaccatcgagggctgctatttcctgcgtcatttcgaagatcagtgg
ctgctgcggttccacctgcaaccggacggcctcggcctgttcagcgaaggcatgctcgcc
ttcgacgggagcggccgcatcctggcggccaaccagagcgccatcaacctgcttggcagc
catcgcgagagcctcgtcggccgttcgctggagcagttcttcgactgtcatctggacgac
ctgctcggccgagccgatccgcgtcccaatgccggttggccgctgcgcacgcattccggg
cgcgttctgtatgccctgctgcgcggtgagcgcccggtggcggccgcgccggtgttgccg
cgagcgccgctggccgccgggctgtgcatcgccgaccagcgcctggcccatgacttccga
cgtgccctgaaggtctacgcccacgacgtgccgctgctgcttcagggcgaaactggcacc
ggcaaggaggccttcgcccgtgccgtgcaccagggcggtgagcgcgctggcaaggcgttc
gtcgcgctgaactgcgcggcgatccccgagagcctgatcgagagcgaactgttcggctat
cgcggcggcagtttcactggtgcgcgcaaggaaggcatgcgcggcaagctgcaacaggcc
gacggcggcacgctgttcctcgacgagatcggcgatatgccgctggcgttgcagacgcgt
ctgctgcgcgtgctggaagagcgccaggtagtgcccatcggcggcgagccgcaggaggtg
gatatccgcctgatcagcgccagccaccgtgacctggaagcgctggtcgccgccgggcaa
ttccgcgaggacctgtactaccgcctcaacggcctggtggtcgcgttgccgccgctgcgc
gagcgcgaggaccgtggcgcgctgctcgaccatctgctcgccgacgaaagcaagggccgc
ctcgtgcgcctggacgaggatgtgcgtcggcatctgctggactactcctggccgggcaac
gtgcgccagttgcgcaacgtgctgcggacgctctgcgcgctgtgcgagggcgggcgtatc
cagatggccgatctgccgccggacctgcgccgtgcgctggctcccgctgcgacccccgcc
gtcatggccgaggagggcggtgacaccctcggcgtggccgagcgcaatgcgctgctggaa
gtgctcgaagcgcagcgctggcacatcagccgcaccgcgcagcaactgggtatcagccgc
aataccctctaccgcaagctcaaccgccacggcctgagcaggaagagcctttcctag
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