Pseudomonas triclosanedens: OU419_04765
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Entry
OU419_04765 CDS
T09689
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
ptrl
Pseudomonas triclosanedens
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptrl03000
]
OU419_04765 (rtcR)
Transcription factors [BR:
ptrl03000
]
Prokaryotic type
Other transcription factors
Others
OU419_04765 (rtcR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_22
AAA_16
NACHT
AAA_30
ATPase_2
AAA_19
TniB
AAA_7
AAA_33
AAA_14
MCM
AAA_2
BrxC_BrxD
Motif
Other DBs
NCBI-ProteinID:
WAI50581
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All DBs
Position
1005723..1007327
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AA seq
534 aa
AA seq
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MPAGRKTVAIGFLGSTLDRVGKGASRWQKWRPTVGLCQQQDLLIDRLELIHGLDARDVSL
AERIAADVRHVSPETEVRLQPMSLRNPWDFEEVYGTLHDFVGGYAFDTEHEDYLVHITTG
THVAQICWFLLTEARYLPARLVQTSPSRRKDEARQPEGTVTLIDLDLSRYDRIATRFRRE
QEESLAFLKSGIATRNADFNRSIEQIERVAGRSRAPMLLIGPTGAGKSFLARRVYELKRA
RHQFQGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQSAREGLLRAADGGMLFLDEIGEL
GLDEQAMLLKAIEEKRFFPLGSDREVGSDFQLIAGTHRDLRERVVDGLFREDLFARINLW
TFDLPGLAGRREDIEPNIDFELERHAREQGRLVRFNREARTRYLDFANSAQALWNGNFRE
LSASITRMATLADSGRIDEALVEEEIGRLRRSWGAAQPEGEVERLLGEGAEALDLFDRLQ
LEAVISICRQARSLSDAGRQLFAASRQEKQNPNDADRLRKYLARFGLDWAALKS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaggacgcaagactgtcgctatcgggtttctcggctctacgctggatcgcgtc
ggcaagggcgcgtcgcgctggcagaaatggcggcccacggttgggctgtgccagcagcag
gacctgctgatcgatcgcctggagctgatccacggcctggatgcgcgggatgtcagcctg
gccgagcgtattgccgccgatgtgcggcacgtttctcctgagaccgaggttcggctgcag
cccatgtcgctgcgcaatccgtgggatttcgaggaggtctacggcacgctgcacgatttt
gtcggcggatatgccttcgataccgagcacgaggattacctggtacacatcaccaccggg
acccacgttgcgcagatctgctggttcctcctgaccgaagcgcgctacctgccggcaagg
ctggtgcagacctcgccgtcgcggcgcaaggacgaggcgcggcagccggaaggaacggtg
acgctgatcgatctcgatctgtcgcgctacgaccgcatcgccacgcgcttccggcgtgag
caggaggaaagcctggctttcctcaagtccggcatcgccacgcgcaatgccgatttcaac
cgctccatcgagcagatcgaacgagtcgctggacgctcccgtgcgccgatgctgctgatc
ggcccgaccggcgcgggcaagtcgttcctcgcccgtcgcgtgtatgaactcaagcgggca
cggcaccagttccagggacgtttcgtcgaggtgaactgcgcgaccctgcgtggcgacggc
gcgatgtcagcattgttcggtcatatcaagggtgccttcaccggtgcgcagagtgctcgc
gaggggctgttgcgtgcggcggatggcggcatgctgttcctcgacgagattggtgaactg
ggcctggacgagcaggccatgctgctgaaggctatcgaggaaaagcgcttctttccgctg
ggttcggaccgtgaggtgggcagcgatttccaactgatcgccggtactcaccgcgatctg
cgcgaacgggtcgtcgacggactgttccgcgaggaccttttcgcccgcatcaatctctgg
actttcgacctgccggggctggctgggcgccgcgaggacatcgagccgaacatcgacttc
gaactggagcgccacgcccgcgaacaggggcgtctggtacgcttcaaccgggaggcgcgg
acgcgctacctggatttcgccaattcggcgcaggcgctgtggaatggcaatttccgcgag
ctgtcggcgtccatcacgcgcatggcgaccctggccgacagcgggcgtatcgacgaggcg
ctggtggaggaggagatcggccggctgcgtcgctcctggggcgcggcgcagccagaaggc
gaagtggagcgcctgctgggcgagggcgccgaggcgctggacctgttcgatcgtctgcaa
ctggaggcggtgatctccatttgccggcaggcgcgcagcctgtccgacgccggacgccag
ttgtttgcggcgtcacgccaggagaagcagaaccccaacgatgccgaccgtttgcgcaag
tacctggcgcgcttcgggctggactgggcggcgctgaagagttga
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