Pseudomonas triclosanedens: OU419_06195
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Entry
OU419_06195 CDS
T09689
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ptrl
Pseudomonas triclosanedens
Pathway
ptrl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OU419_06195 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrl03400
]
OU419_06195 (recD)
Enzymes [BR:
ptrl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OU419_06195 (recD)
DNA repair and recombination proteins [BR:
ptrl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OU419_06195 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
SH3_13
NAT10_TcmA_helicase
UvrD-helicase
T2SSE
NTPase_1
AAA_28
SLFN-g3_helicase
HerA_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WAI50844
UniProt:
A0ABY7A3Z6
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All DBs
Position
1309415..1311451
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AA seq
678 aa
AA seq
DB search
MNAPPTDASQMLDLLGRWAERGWLRELDRAFAVFLVERAADAHPLLVLAAALASHQLGRG
HVCLDLEATLADSRFALSLPPEGDTAKDAPELPGVLLDGMQLAAWQAALNDPRLVGEGAG
DTPLVRVGKRLYLRRYWQYECEVRAGIDQRLRQGEALRASLPVAQLRQALDALFPKRADA
PADWQKLACALVAGNAFGIVTGGPGTGKTTTVVKLLALLQSLALGEGGRPLRIRLAAPTG
KAAARLNESISGAVQGLKLDALPDGEAARAAIPTDVTTLHRLLGSRPDSRQFRHHAGNPL
ALELLVVDEASMVDLEMMAALLAALPPRARLILLGDKDQLASVEAGAVLGELCSRARDGH
YRPASRDWLEAVTGEHIDPALLDDQGSDLDQAVAMLRHSHRFSADSGIGQLAEAVNAGDI
AALRNVWKARHEDLARITVDARDTRSLRDLVVDGGRGGDLFGPAGYRHYLSVLASNRPES
DAGQAALDAWAREVLQAHGQFQLLCALRRGPWGVEGLNELIAELLHREGLIPGVHGWFLG
RPVLVTRNDYGLGLMNGDIGIALALPQADEDGGVRWVPRVAFPAGDGGDEIRWILPSRLQ
AVETVFAMTVHKSQGSEFTHAALLLPDSLNPILTRELVYTGITRARSWFTLASAGRGWHV
LEQATERRVQRASGLLEG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgccgcccaccgacgcctcccagatgctcgacctgcttggccgctgggccgaa
cgtggctggctgcgcgaactggaccgcgccttcgccgtcttcctggtggaacgcgcggcg
gatgcgcatccgctgctggttcttgcagccgcgctggccagccaccagctaggccgcggc
catgtctgcctcgacctcgaagccaccctggccgacagccgtttcgcactgtcgctgccg
ccagagggcgacaccgccaaggacgctcccgagctgcccggtgtgctgctcgacggtatg
caactggcagcctggcaggctgcgctgaacgacccccggctggtcggcgaaggcgccggc
gacaccccgctggtacgggtcggcaagcgcctgtacctgcgccgctactggcagtacgaa
tgcgaagtgcgcgccggcatcgatcagcgcctgcgccagggcgaagcgttgcgagcctca
ctgcctgtcgcgcagttgcgccaggcgctggatgcgctcttcccgaaacgggccgatgct
ccggccgactggcagaagctcgcctgcgcgctggtcgccggcaacgccttcggcatcgtc
accggcggccccggcaccggcaagaccaccaccgtggtcaagctgctggcgctgttgcag
agcctggcgctgggggagggcggccgaccgctgcgcatccgcctggccgcgcccaccggc
aaggcggcggcgcgcctcaatgaatcgatttccggcgcggtgcaagggctgaaactggac
gcgctgcccgatggcgaagcggcccgggcggcgattcccaccgacgtcaccacgctgcac
cgcctgctcggcagccgcccggacagccgccagttccgccaccatgccggcaacccgctg
gcgctggagctgctggtggtggacgaagcctcgatggtcgacctggaaatgatggcggca
ttgctcgccgcgctgccgccccgcgcacggctgatcctgctcggcgacaaggaccagctc
gcctcggtggaagccggtgcggtgctgggcgagctgtgcagccgcgcccgcgacggccac
taccgtccggccagccgcgattggctggaggccgtgaccggcgagcacatcgacccggcg
ctgctcgacgatcagggcagcgacctcgaccaggccgtggccatgttgcgccacagccac
cgtttcagcgccgacagcggcatcggccagttggccgaggcggtgaacgcaggggacatt
gcggcgttgcgcaacgtctggaaggcccgtcacgaagacctggcgcgcatcaccgtggac
gcccgggacacccgcagcctgcgcgacctggtggtggatggcggacgcggcggcgacctg
ttcgggccggccggttatcgccattacctgagcgtgctggcgagcaaccggccggagagt
gatgccggccaggccgcgttggacgcctgggcgcgggaagtgctgcaagcccacgggcaa
ttccagttgctctgcgcgctgcgtcgcgggccctggggcgtggaaggcttgaacgagctt
atcgccgaactgctgcatcgtgaaggactgatccccggtgtgcacggctggttccttggc
cgccctgtgctggtcacgcgcaacgactacgggctgggcctgatgaacggcgacatcggc
atcgccctggcgctgccccaggccgacgaagacggcggtgtgcgctgggtgccgcgagtg
gcgttcccggcgggcgatggcggcgacgagatacgctggatcctgcccagccgcctgcaa
gccgtggaaacggtgttcgccatgaccgtgcacaaatcccaaggctcggagttcacccat
gcggccctgctgctgcccgacagcctcaaccccatccttacccgcgagctggtctacacc
ggcatcacccgcgcccgtagctggttcaccctggccagcgccgggcgtggctggcacgtg
ctggagcaggccaccgagcgtcgggtacagcgggcgagcgggttgctggaggggtga
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