Pseudomonas triclosanedens: OU419_07155
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Entry
OU419_07155 CDS
T09689
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ptrl
Pseudomonas triclosanedens
Pathway
ptrl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OU419_07155 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrl03019
]
OU419_07155 (rnc)
03009 Ribosome biogenesis [BR:
ptrl03009
]
OU419_07155 (rnc)
03036 Chromosome and associated proteins [BR:
ptrl03036
]
OU419_07155 (rnc)
Enzymes [BR:
ptrl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OU419_07155 (rnc)
Messenger RNA biogenesis [BR:
ptrl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OU419_07155 (rnc)
Ribosome biogenesis [BR:
ptrl03009
]
Eukaryotic type
90S particles
RNase
OU419_07155 (rnc)
Prokaryotic type
rRNA processing factors
OU419_07155 (rnc)
Chromosome and associated proteins [BR:
ptrl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OU419_07155 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DUF6961
Motif
Other DBs
NCBI-ProteinID:
WAI51028
UniProt:
A0ABY7A1R4
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All DBs
Position
1518105..1518794
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AA seq
229 aa
AA seq
DB search
MSNSLDRLERKLGYTFRDQDLMVLALTHRSFAGRNNERLEFLGDAILNFVIGEALFNHFP
QAREGQLSRLRARLVKGETLALLARGFELGDYLRLGSGELKSGGFRRESILADAMEALIG
AIYLDTGMDSARERIMAWLGPQLRELTPVDTNKDPKTRLQEFLQSRGCELPRYDVVDIQG
EPHCRTFFVECEVALLNDKTHGHGGSRRIAEQVAAAAALAALGVENGHE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaacagcctggatcgactcgagcgcaagcttggctatacctttcgcgaccaggac
ctgatggtcctggcgctgacccatcgcagtttcgccgggcgcaacaatgagcgtctggag
ttcctgggtgacgccatcctcaacttcgttatcggcgaagcccttttcaatcatttcccc
caggctcgcgaaggccagctttcgcgcctgcgcgcgcgcctggtcaagggcgagaccctg
gccctgctggcccgtggcttcgagctgggcgactacctgcgactgggctccggcgagctg
aagagcggtggattccgccgcgagtcgattctggcggatgcaatggaggcgctgatcggc
gccatctatctggataccggcatggattccgcccgcgagcggatcatggcctggctgggc
ccgcaattgcgcgagctgaccccggtagacaccaacaaagaccccaagacccgcctgcag
gaattcctgcagtcgcgcgggtgcgagttgccgcgttacgacgtggttgatatccagggc
gagccgcattgccgcaccttcttcgtcgagtgcgaagttgccctgttgaatgacaagacc
cacggtcacggcggcagccgtcgcatcgccgagcaggtggccgccgccgccgctctggca
gccctgggcgtggagaatggccatgagtga
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