Pseudomonas triclosanedens: OU419_09890
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Entry
OU419_09890 CDS
T09689
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ptrl
Pseudomonas triclosanedens
Pathway
ptrl02020
Two-component system
ptrl02025
Biofilm formation - Pseudomonas aeruginosa
ptrl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OU419_09890
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
OU419_09890
09142 Cell motility
02040 Flagellar assembly
OU419_09890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptrl03000
]
OU419_09890
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ptrl02035
]
OU419_09890
Transcription factors [BR:
ptrl03000
]
Prokaryotic type
Helix-turn-helix
Other families
OU419_09890
Bacterial motility proteins [BR:
ptrl02035
]
Flagellar system
Flagellar assembly proteins
Others
OU419_09890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
nSTAND3
AAA
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WAI51533
LinkDB
All DBs
Position
2101859..2103334
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDNQERCRDLSVIIGFLGEDQLSCCSRDWRQSVDALPNGSRDVLCVLVGS
VESKGGSLELLKQLAAWDEYLPVLLIGEPAPGDWPEELRRRVLASLEMPPSYNKLLDSLH
RAQVYREMYDQARERGRQREPNLFRSLVGTSRAIQQVRQMMQQVADTDASVLILGESGTG
KEVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANG
GTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQNVDVRIIAATHKNLEKMIEDGSF
REDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHDWP
GNVRELANLVERLAIMHPYGVIGVGELPKKFRHVDDEDEQLASSLREELEERAAITAGLP
GLDSPAMLPAEGIDLKDYLANLEQGLIQQALDDASGVVARAAERLRIRRTTLVEKMRKYG
MSRREEEMAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgcgaaaccaagattctcctgatcgatgacaaccaggaacggtgccgtgatctc
tcggtcatcatcggcttcctcggcgaagaccaactctcatgctgcagccgcgactggcgc
cagtctgtcgatgcgttacccaacggcagccgcgatgtcctgtgcgtgctggttggcagc
gtggaaagcaagggcggatcgctggagctgctcaagcaactggcggcctgggacgaatac
ctgccggtgctgctgatcggcgagccggcccccggcgactggcccgaagagctgcgccgc
cgcgtgctggccagcctggagatgccgcccagctacaacaagctgctcgattccctgcac
cgtgcccaggtctaccgcgagatgtacgaccaggcccgcgagcgcggccgccagcgcgag
cccaacctgttccgcagcctggtcggcaccagccgtgcgatccagcaggtgcggcagatg
atgcagcaggtcgccgacaccgacgccagcgtgctgatcctcggtgagtccggtaccggc
aaggaagtggtggcgcgcaaccttcactaccattccaagcgccgcgatgcgcccttcgtg
ccggtcaactgcggagcgatcccggcggaattgctggaaagcgagctgttcggccacgag
aagggcgccttcaccggcgccatcaccagccgcgccggccgcttcgagctggccaacggc
ggcaccctgttcctcgacgaaatcggcgacatgccgctgccgatgcaggtcaagctgctg
cgcgtgctgcaggagcgcactttcgagcgcgtcggcagcaacaagacgcagaacgtggac
gtgcgcatcatcgccgccacccacaagaacctcgaaaagatgatcgaggacggcagcttc
cgcgaagatctctactatcgactcaacgtcttccccatcgagatggccccgctgcgcgag
cgcgtggaggacatcccgctgctgatgaacgagttgatctcgcgcatggagcacgagaag
cgcggatcgattcgcttcaactccgccgccatcatgtcgctctgccgtcacgactggccg
ggcaatgtgcgcgagctggcgaacctggtggagcgcctggcgatcatgcacccctatggc
gtgattggcgtaggcgaactgccgaagaagttccgccacgtcgatgacgaggacgagcaa
ctggcgagcagcctgcgcgaggaactggaagagcgcgcggcgatcaccgccggcctgccg
ggcctcgactcgccggccatgctgccggccgagggcatcgacctgaaggattacctggcc
aacctggagcagggtctgatccagcaggcgctggacgatgccagcggtgtcgtcgcccgt
gccgccgaacgcctgcgcatccgccgcaccacgctggtggagaaaatgcgcaagtacggc
atgagccgccgcgaagaggagatggcggaggattga
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