Pseudomonas triclosanedens: OU419_18620
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Entry
OU419_18620 CDS
T09689
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ptrl
Pseudomonas triclosanedens
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrl03032
]
OU419_18620
03036 Chromosome and associated proteins [BR:
ptrl03036
]
OU419_18620
03400 DNA repair and recombination proteins [BR:
ptrl03400
]
OU419_18620
DNA replication proteins [BR:
ptrl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OU419_18620
Chromosome and associated proteins [BR:
ptrl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OU419_18620
DNA repair and recombination proteins [BR:
ptrl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OU419_18620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
Motif
Other DBs
NCBI-ProteinID:
WAI47782
LinkDB
All DBs
Position
complement(4023227..4023505)
Genome browser
AA seq
92 aa
AA seq
DB search
MPMTKDQLVRDIAESLDLTQAAVRGVFEQLAQIAQDSLENDGELTLPGIGKLKVSERAAR
TGRNPQTGKAIQIAAKKSVRLVPAKALVDSLN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgaccaaggaccaactggttcgcgatatcgccgaatccctcgacctgacccag
gctgccgttcgcggcgttttcgagcaattggcgcagatcgcccaggactccctggagaac
gacggcgagctgaccctgccgggtatcggcaagctcaaggtcagcgagcgcgccgcccgt
accggccgcaatccgcagactggcaaggctattcagatcgccgcgaagaagtcggtgcgc
ctggtgcccgccaaggctctggtcgacagcctgaactga
DBGET
integrated database retrieval system
