Pseudomonas triclosanedens: OU419_19115
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Entry
OU419_19115 CDS
T09689
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ptrl
Pseudomonas triclosanedens
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptrl03016
]
OU419_19115 (thpR)
Enzymes [BR:
ptrl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
OU419_19115 (thpR)
Transfer RNA biogenesis [BR:
ptrl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
OU419_19115 (thpR)
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WAI47872
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All DBs
Position
4124425..4124943
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AA seq
172 aa
AA seq
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MSTPPLRLFFAVPCPAPLTEAICTWRDTLHLDGQPVAPGNLHLTLAFLGAVPRGRKAELL
GIGASLPRQSFILRLDHLARWKNGILHLVPSHTPAELHHLVTVLRDALQSGGFEVEQRPF
HPHLTLARHAHTLPIAQPAFELPASAITLYSSENSPAGVHYRPLGNWPLDHA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcccccgttacggctgtttttcgccgtgccctgtccagcccccctgaccgag
gcgatctgtacctggcgcgacaccttgcacctggacggccaacccgtcgcaccgggcaac
ctgcacctgaccctggcctttctcggcgccgtaccgcgcgggcgcaaggcagaactgctg
ggcatcggagcgagcctgccgcgccagagcttcatcctgcgtctcgatcacctggcacgc
tggaagaacggcatcctgcacctcgtgccgagccacaccccggccgaacttcaccacctc
gtgacagtgctgcgtgacgctttgcaatccggcgggttcgaagtggaacagaggcccttc
cacccgcacctcaccctggcccgccacgcccatacgctgcccatcgcgcaaccggcgttc
gaactgccggccagcgccatcaccctctacagctcggagaacagccctgccggcgtacac
tatcgtccgctcggcaactggccgctagaccacgcctga
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