Pseudomonas triclosanedens: OU419_19625
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Entry
OU419_19625 CDS
T09689
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ptrl
Pseudomonas triclosanedens
Pathway
ptrl00071
Fatty acid degradation
ptrl00280
Valine, leucine and isoleucine degradation
ptrl00310
Lysine degradation
ptrl00362
Benzoate degradation
ptrl00380
Tryptophan metabolism
ptrl00410
beta-Alanine metabolism
ptrl00640
Propanoate metabolism
ptrl00650
Butanoate metabolism
ptrl00907
Pinene, camphor and geraniol degradation
ptrl00930
Caprolactam degradation
ptrl01100
Metabolic pathways
ptrl01110
Biosynthesis of secondary metabolites
ptrl01120
Microbial metabolism in diverse environments
ptrl01200
Carbon metabolism
ptrl01212
Fatty acid metabolism
Module
ptrl_M00087
beta-Oxidation
ptrl_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OU419_19625 (fadB)
00650 Butanoate metabolism
OU419_19625 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
OU419_19625 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OU419_19625 (fadB)
00310 Lysine degradation
OU419_19625 (fadB)
00380 Tryptophan metabolism
OU419_19625 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OU419_19625 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OU419_19625 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OU419_19625 (fadB)
00930 Caprolactam degradation
OU419_19625 (fadB)
Enzymes [BR:
ptrl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OU419_19625 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OU419_19625 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OU419_19625 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
OU419_19625 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WAI47968
LinkDB
All DBs
Position
complement(4229545..4231692)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYQGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVTS
GKGVFIVGADITEFVDNFKLPDEELLAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRIIGCDNAVEWIASGKENKAEDAL
KVGAVDAVVAPEQLQAAALDLVKRAIAGELDHKARRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEIEAQGFVKLAKTSVAQSLIGLFLNDQDL
KKKAKQHDEIAKDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLNEAAKL
LGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEGVVK
EDAVLASNTSTISINLLAKALKRPQNFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKIMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGRTAVDVMYDANRLGQKNGKGFYAYETDKRGKP
KKVSDPAAYELLKSIVTEQRELTDEDIINYMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGALYHPTAKLREMAKNGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgagctg
aatttcgacctcaagggcgagtccgtcaacaagttcaaccgactcaccctgaatgagctg
cgtcaagcagtcgataccatcaaggccgatgcgtccgtcaagggcgtgatcgtgaccagc
ggcaagggcgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaaactg
cccgacgaagagctgctggccggcaacctcgaagccaacaagatcttcagtgacttcgaa
gacctgaacgttccgaccgttgccgcgatcaacggcatcgccctgggcggcggtctggaa
atgtgcctggccgcggacttccgcgtaatgagcgctaccgccaagatcggcctgccggaa
gtgaagctgggcatctacccgggcttcggcggtaccgtgcgtctgccgcgcatcatcggc
tgcgacaacgctgtcgagtggatcgcctcgggcaaggaaaacaaggctgaggacgcgctg
aaagtaggtgccgtcgacgctgtcgtggctcctgagcaactgcaagccgccgctctcgac
ctggtcaagcgcgccatcgccggtgagctggatcacaaggcccgccgccagccgaagctg
gaaaagctcaagctgaacgccatcgagcagatgatggccttcgaaaccgccaagggcttc
gttgccggccaggctggcccgaactacccggcaccggtcgaagccatcaagtcgatccag
aaagccgccaacttcggtcgcgacaaggcgctggaaatcgaagcccagggcttcgtgaaa
ctggccaagacctcggttgcgcagagcctgatcggcctgttcctcaacgaccaggacctg
aagaagaaggccaagcagcacgacgaaatcgccaaggacgtgaaactggccgccgtactg
ggcgccggcatcatggggggcggcatcgcctaccagtccgcttccaagggcactccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggtctgaacgaagccgcgaagctg
ctgggcaagcgcgtcgaaaaaggccgcatgaccccggccaagatggccgaggcgctgaac
gccattcgcccaaccatgtcctacggcgacttcggcaacgtcgacatcgttgtcgaggcc
gtggtcgagaatccgaaggtcaagcagatcgttctggcagaagttgaaggcgtcgtgaag
gaagatgcggtcctcgcatccaacacctccaccatctccatcaacctgctggccaaggcg
ctcaagcgtccgcagaactttgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgacgtagccgttgctaccaccgtggcc
tacgccaagaagatgggcaagaacccgatcgtggtgaatgactgccccggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttctccaagctgctgggcttcggtgtggac
ttcgtgcgcatcgacaagatcatggagaagttcggctggcccatgggcccggcctatctc
tccgacgtcgtcggtatcgacaccggccaccacggccgtgatgtgatggccgaaggcttc
ccggatcgcatggcagtggaaggcaggaccgccgttgacgtgatgtacgacgccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aaaaaggtttccgatccggccgcctacgaactgctgaagtccattgtgaccgagcagcgc
gagctgaccgacgaagacatcatcaactacatgatgatcccgctgtgcctggaaaccgta
cgctgcctggaagacggcatcgtcgagaccgctgccgaggctgacatgggcctgatctat
ggcatcggcttccctcccttccgtggcggtgccctgcgttacatcgactccatcggtgtg
gccgagttcgtcgccctggccgacaagtacgccgatctgggtgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagaagttcttcggttga
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