Pseudomonas triclosanedens: OU419_21815
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Entry
OU419_21815 CDS
T09689
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ptrl
Pseudomonas triclosanedens
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptrl03036
]
OU419_21815 (xerD)
Chromosome and associated proteins [BR:
ptrl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
OU419_21815 (xerD)
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Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Vault_4
Motif
Other DBs
NCBI-ProteinID:
WAI48373
LinkDB
All DBs
Position
complement(4712624..4713520)
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AA seq
298 aa
AA seq
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MTPVANVLIDRFLDALWLEKGLSDNTRSAYGSDLALFNGWLSERGVALEAAGREVILDHL
SWRLGEGYKARSTARFLSGARGFYRYCLREGLISEDPTLLIDLPQLGKPLPKSLSEADVE
ALLAAPETDDPLGLRDRTMLEVLYACGLRVSELVGLTLEQINLRQGVVRVFGKGSKERLV
PLGEEAIAWIERYLREARADLLAGRPSDVLFPSLRGEQMTRQTFWHRIKLHAKVAGIGKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQDLHAQHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgttgcaaatgtgctgattgatcgttttctcgatgcgctctggctggaaaag
gggctgtcggacaacacccgcagcgcctacggcagcgatctggcgctgttcaacggctgg
ctcagcgagcgcggtgtggcgctcgaggcggctggccgcgaggtcatactcgatcacctg
tcctggcgcctgggcgaaggctacaaggcacgctccaccgcgcggtttctctccggcgcg
cgcggcttctaccgttactgtctgcgcgaagggctgatcagcgaggatccaaccttgctg
atcgatctgccgcaactgggcaagccattgcccaagtcgctatcggaggcggacgtcgaa
gcgctgctggccgcgccggagacggatgatccgctgggcctgcgcgaccgcaccatgctc
gaagtgctgtacgcctgcgggctgcgggtcagcgaactggtcggcctgacgctcgagcag
atcaacctgcgccagggcgtcgtgcgtgtcttcggcaaaggcagcaaggaacgcctcgta
ccgctgggagaggaggccatcgcgtggatcgaacgctacctgcgcgaggcccgtgccgat
ctgctggccggtcgcccgagcgatgtgctgtttcccagcctgcgcggcgagcagatgacc
cgccagaccttctggcatcgcatcaagctgcacgccaaggtcgccgggatcggcaagagc
ctctcgccccatacactgcgccatgccttcgccacgcatctgctcaaccacggggcggac
ctgcgggtagtgcagatgctgctggggcacagcgacctgtccactacccagatctacacc
cacatcgcccgcgcgcggttgcaggacctccacgcccagcaccaccccagggggtga
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