Pseudomonas triclosanedens: OU419_22290
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Entry
OU419_22290 CDS
T09689
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ptrl
Pseudomonas triclosanedens
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrl03400
]
OU419_22290 (sbcD)
DNA repair and recombination proteins [BR:
ptrl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OU419_22290 (sbcD)
Archaeal homologous recombinant proteins
OU419_22290 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
WAI48464
LinkDB
All DBs
Position
complement(4812775..4813995)
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AA seq
406 aa
AA seq
DB search
MRILHTSDWHLGQHFMGKSREAEHQAFCAWLIEQVREREVDAVIIAGDVFDTGAPPSYAR
EQYNRFIVDLRETGARLVVLGGNHDSVAMLEESRGLLACLDTQVIAAVGADLDAQLLVLA
QRDGQPGAILCAIPFIRPRDVLTSQAGQSAQDKQLALQQAIQAHYRQLFERAEAQRAALG
RHLPIIATGHLTTVGASASESVREIYVGSLEAFPTSAFPPADYIALGHIHRPQKVAGLEH
IRYSGSPIALSFDEATQGKEVLLVDLDDSGLRGITALPVPCFQPMKSVSGSLASLPAELE
RAARDGSTERPVWLEVLVHTDDYLSDIQLRVEKLCEALPAIVLRTRRERGTAQASLFSQT
KETLDELSPEDVFRQRLDAEDLEAPLRERLTGLYRQVVSELQEERP
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctccacacctccgactggcacctgggccagcacttcatgggcaagagccgc
gaggccgagcatcaggcgttctgtgcctggctgatcgagcaggtacgcgaacgcgaggtg
gacgcggtgatcatcgccggcgacgtgttcgacaccggcgcaccgcccagctacgcccgc
gagcagtacaaccgcttcattgtcgatttgcgcgagaccggtgcgcggctggtggtgctc
ggtggcaaccatgactctgtggccatgctggaggaatcccgtggtttgctggcgtgcctg
gatacccaggtgatcgcagccgtcggggccgatctcgatgcgcagttactggtgcttgcg
caacgtgacggccagcccggcgccatcctctgcgcgatcccgttcatccgcccgcgcgat
gtgctcaccagccaggccgggcagagcgcgcaggacaagcaactggcgctgcaacaggcg
atccaggcgcattatcggcagctcttcgagcgtgccgaggcacagcgtgcggccctggga
cggcacctgccgataatcgccaccgggcacctgaccaccgttggcgccagcgccagcgaa
tcggtgcgggaaatctacgtcggcagcctcgaagccttcccgaccagtgcattcccgccg
gctgactacatcgccctgggacacatccatcgaccccagaaagtggcggggctggagcac
attcgctacagcggctcgcccatcgcgctgagtttcgacgaggcaacccagggcaaggaa
gtgctgctggtggacctggatgacagcggcctgcgtggtatcaccgcgctgccggtgccg
tgtttccagccgatgaaatcggtatccggcagccttgccagcctgcccgccgaactggag
cgcgcagcccgcgatggcagcaccgagcggccggtatggctggaggtgctggtgcatacc
gacgactacctcagcgacatccagttgcgcgtcgagaaactttgcgaagcgctgcctgcc
atcgtcctgcgcacccgccgcgaacgcggcacggcgcaggcctcgctgttcagccagacg
aaggagacgctggacgagctcagcccggaagacgtgttccgccagcgcctggatgccgag
gatctggaggcgccgttgcgcgaacggctgaccgggctgtaccggcaagtggtcagcgaa
ctgcaggaggagcgcccgtga
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