Pseudomonas triclosanedens: OU419_23630
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Entry
OU419_23630 CDS
T09689
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptrl
Pseudomonas triclosanedens
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrl03400
]
OU419_23630 (phrB)
Enzymes [BR:
ptrl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OU419_23630 (phrB)
DNA repair and recombination proteins [BR:
ptrl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OU419_23630 (phrB)
Prokaryotic type
OU419_23630 (phrB)
BRITE hierarchy
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Gene cluster
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WAI48719
LinkDB
All DBs
Position
5103376..5104803
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AA seq
475 aa
AA seq
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MRRQLVWLRCDLRLRDNTALAAAAERGPVIALFLLSPAQWREHDDAACKIDFWLRNLHEL
RRELAGLNIPLLVRTADRWSDSAGVIARLCHDLDIETVHVNEEYGVNEAARDSRVKAELA
RHGLGWRSYLDQLLFAPGTVLSKGGGYFQVYGQFRKVCYERLNAGVPPLQPMPPRQAPLA
LASDPIAERIAGFDPPSQDLRDHWPAGEREAHERLQGFCDERLGSYHDCRDFPATDGTSG
LSPYLAAGVLSPRQCLHAALASNHGEFETGGSGAVTWINELLWREFYKHILVGFPRVSRH
RAFRLETEALSWRRSVTELEAWQQGRTGFPIIDAAMRQLLATGWMHNRLRMVVAMFLTKN
LLIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPISQSERFDPEGRF
IRRWIPELAALDARTMHDPAKLGLFGAAGYPQPMVDLSITRERALLAFKNLSARR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggcaactggtctggttgcgctgtgacctgcgcctgcgggacaacacggcgctc
gccgcagccgccgagcgcggaccggtgatcgcactgttcctgctcagccccgcccagtgg
cgcgaacacgacgatgccgcctgcaagatcgacttctggctgcgcaaccttcacgagctg
cgccgcgagctcgccgggctgaacattcccctgctggtacgcacggcggatcgctggagc
gactcggcgggggtaatcgcccggttgtgccacgacctggatatcgagaccgtacacgtc
aacgaagagtacggggtgaacgaagcggcacgagacagcagggtcaaggccgaactcgcg
cgccacggcctcggctggcgcagctatctcgaccagttgctcttcgcccccggcaccgtg
ctaagcaaaggcggtggctacttccaggtctacggccagttccgcaaggtctgctacgaa
cggctgaacgccggggttccgccgctgcaaccgatgccgccccgacaagcccccctggcg
ttggccagcgacccgattgccgagcgcatcgcaggattcgaccctccctcgcaggatttg
cgcgatcactggccggctggcgaaagggaggcccacgagcgtctgcaaggcttctgcgac
gaacgcctcggcagctatcacgactgccgcgactttcccgccaccgacggcaccagcggg
ctctcgccctatctcgccgctggcgtgctctcgccccgccaatgcctgcacgcggcgctg
gccagcaatcacggggagttcgaaaccggaggcagcggcgcggtcacctggatcaacgaa
ctgctctggcgcgagttctacaagcatattctcgtaggctttccgcgcgtcagccggcac
cgcgccttccgcctggaaaccgaggcgttgtcctggcgtcgctcggtgacggaactggag
gcctggcagcaaggacgcaccggcttcccgatcatcgacgccgcaatgcgccagctactg
gccaccggctggatgcacaatcgcctgcgcatggttgtggcgatgttcctgaccaagaat
ctgctgatcgactggcgggaaggcgaacgctggttcatgcgccacctgatcgacggcgac
ctggccgcgaacaacggcggctggcagtggagcgcttccaccggcaccgacgccgtgccc
tacttccgcatcttcaacccgatatcccagtccgaacgcttcgacccggaaggccgcttc
attcgccgctggataccggaactcgcggcgctggatgcacgcacgatgcacgatccggcg
aagctcggcctgttcggcgccgccggttatccacagccgatggttgacctttctatcacg
cgggaacgagccctgctcgccttcaagaatctctcggcacggcgttga
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