Paraburkholderia tropica: G5S35_00015
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Entry
G5S35_00015 CDS
T07044
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ptro
Paraburkholderia tropica
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptro03032
]
G5S35_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
ptro03400
]
G5S35_00015 (gyrB)
Enzymes [BR:
ptro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G5S35_00015 (gyrB)
DNA replication proteins [BR:
ptro03032
]
Prokaryotic type
DNA Topoisomerases
G5S35_00015 (gyrB)
DNA repair and recombination proteins [BR:
ptro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5S35_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QNB10111
LinkDB
All DBs
Position
A:3005..5476
Genome browser
AA seq
823 aa
AA seq
DB search
MTDTNNSQPDNSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCNDIHVVIHADNSISITDNGRGIPTDVKMDDKHDPKRSAAEIVMTELHAGGKFDQNS
YKVSGGLHGVGVSCVNALSSFLRLTVRRNGKKHFMEFHRGVPQNRILEERDGVTVSPMQL
LGDTENRGTEVHFMADETIFGSVEYHYDILAKRIRELSFLNNGVRIRLTDQRSGKEDDFA
FAGGVKGFVEYINKAKTVLHPNIFYISSEKDGVGVEVAMQWNDSYNESVLCFTNNIPQRD
GGTHLTGLRAAMTRVINKYIADNEIAKKAKVETSGDDMREGLSCVLSVKVPEPKFSSQTK
DKLVSSEVRAPVEDVVAKALEDFLQETPNDAKTICSKIVDAARARDAARKAREMTRRKGV
LDGVGLPGKLADCQEKDPAKSEVYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKAR
YDKLLSSEQIVTLITALGCGIGKEDYNLEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQ
MPEMIERGYVYIAQPPLYKLKAGKDERYLKDDADLNAHMLRLALNGSELVPTEGATPISG
DALGELARSYQLARAVVDRLSRLYDVRALEAIMDGVAIDLSSEESTEASARALEAHLRDD
PLKPEVSVVPMYDAVREQRSLRVERRHHGNVKVSVIDEEFQLTADYQQLVNTANTFKGLI
GKNALIKRGERSMAVTDFKSAMKWLIADAERNVSKQRYKGLGEMNPEQLWETTMDPTVRR
LLRVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgactgatacgaacaactcgcaacccgacaacagctacggcgcctcgtcgatccagatc
ctcgaaggtctggaagcggtgcgcaagcgtcccgggatgtacatcggcgacacgtcggac
ggcaccggtctgcaccacctcgtcttcgaagtgctggacaactccatcgacgaagcgctc
gccggctattgcaacgacattcacgtcgtcattcacgccgacaactcgatctcgatcacc
gacaacggccgcggcattcccacggacgtgaagatggacgacaagcacgatccgaagcgc
agcgccgctgaaatcgtgatgaccgagctgcacgcgggcggcaagttcgaccagaacagc
tacaaggtctcgggcggcctgcacggcgtgggcgtctcgtgcgtgaacgcgctgtcgagc
ttcctgcgcctgaccgtgcgccgcaacggcaagaagcacttcatggaattccaccgtggc
gtgccgcagaaccgcattctcgaagagcgcgacggcgtgacggtgtcgcccatgcaactg
ctcggcgacacggaaaaccgtggcaccgaagtgcacttcatggccgatgaaaccatcttc
ggcagcgtcgaatatcactacgacattctcgccaagcgcatccgcgaactctcgttcctg
aacaacggcgtgcgtatccgcctgaccgaccagcgctcgggcaaggaagacgatttcgcg
ttcgcgggcggcgtgaagggcttcgtcgagtacatcaacaaggcgaaaacggtcctgcat
ccgaacatcttctacatctcgagcgagaaggacggcgtgggcgtggaagtcgccatgcag
tggaacgacagctacaacgaaagcgtgctgtgcttcacgaacaacatcccgcagcgcgac
ggcggcacgcacttgacggggctgcgcgcggcgatgacgcgcgtgatcaacaagtacatc
gccgacaacgaaatcgccaagaaggcgaaggtcgaaacctcgggcgacgacatgcgcgaa
ggtctgtcgtgcgtgctctccgtgaaggtgccggagccgaagttcagctcgcagacgaag
gacaagctggtgtcgtcggaagtgcgcgcgccggtggaagacgtcgtggcgaaggcgctg
gaagacttcctgcaggaaacgccgaacgacgcgaagaccatttgcagcaagatcgtcgac
gccgcgcgtgcgcgcgacgccgcgcgcaaggcgcgtgaaatgacgcgacgcaagggcgtg
ctcgacggcgtgggcctgccgggcaagctcgcggactgccaggagaaggatccggcgaag
tccgaggtgtatatcgtcgagggcgactcggcaggcggctcggccaagcaaggccgcgac
cgcaagttccaggcgatcctgccgctgcgcggcaaggtgctgaacgtcgagaaggcgcgc
tacgacaagttgctgtcgtcggagcagatcgtcacgctgattaccgcgctcggttgcggt
atcggcaaggaagattacaacctcgagaagctgcgttatcaccgcatcatcatcatgacc
gatgcggacgtggacggcgcgcacatccgcacgctgctgctgacgttcttctatcggcag
atgccggagatgatcgagcgcggttacgtgtatatcgcgcagccgccgctttacaagctc
aaggcgggcaaggacgagcgttatctgaaggacgacgccgatctgaacgcgcatatgctg
cgtctggcgctgaacggttcggaactggtgccgaccgaaggcgcgacgccgatttcgggt
gatgcgctgggcgagctggcaaggtcgtatcagttggcgcgcgccgtggtggatcgcttg
tcgcgtctgtatgacgtgcgggcgctcgaagccattatggatggcgtggcgatcgatctg
tcgagcgaggagtcgacggaggcttcggctcgtgcgcttgaggcgcatctgcgcgacgat
cctttgaagccggaagtgtccgttgtgccgatgtatgacgcggtgcgcgagcagcgttcg
ctgcgcgtggagcgtcgtcatcatggcaacgtcaaggtttccgtgatcgacgaagagttc
cagctgacggcagattatcagcagctcgtgaataccgcgaatacgttcaagggtttgatc
ggcaagaatgcgctcatcaagcggggcgagcgcagcatggcggtgacggacttcaagagc
gcgatgaagtggctgatcgcggatgctgagcgcaatgtttcgaagcagcgttataagggg
ctcggcgagatgaaccctgagcagctctgggaaacgacgatggatccgactgtgcgtcgt
ctgctgcgcgtgcagatcgaggatgcgattgctgcggatgggatttttactacgttgatg
ggtgatgacgtggagccgcgtcgcgcgtttatcgagagcaatgcgctgcgggcggggaat
attgatgtttga
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