Paraburkholderia tropica: G5S35_01660
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Entry
G5S35_01660 CDS
T07044
Name
(GenBank) transporter substrate-binding domain-containing protein
Organism
ptro
Paraburkholderia tropica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
Response_reg
SBP_bac_3
PAS_4
PAS
Hpt
Exonuc_VII_S
PAS_9
SIT
Motif
Other DBs
NCBI-ProteinID:
QNB12745
LinkDB
All DBs
Position
A:351288..355925
Genome browser
AA seq
1545 aa
AA seq
DB search
MALAFCLAITLTTAFAAPARAQQVANANANSVAAGSQTASMPSRLVVGVLTGGWPPLEVL
DEHALSGFSAEYLRLLVGPSVQLVPRVYPDMSALLAGACAGEVDVIMSIARVPQRERCLA
FTVPYLSGGSAFVTRAGNEAVATTASRLAHARIAVEKGYVLEAMLRERFPQATLVTFANT
GAALHAVAHGAADVYAGFAPVVRYQLSFDDYAGLRVAFEVRVNVRELRFGVPVSKIALRD
RLNVLASGVRPAAATALQARWLDGHPAAGADDAQTTGAQRVPPFTLDARERAWLAALPPL
KVGFDADWLPFSAMAARDGATGMANDYLDYLSRTLGVTFTRVPVANWLGVDAPFRRGDFA
LLAAATDEGVLSEGTRYTQAYERYPLVIVGRRDEPMSRGLKDYATRRVVLSPHAPPSSLL
FGSAVPAQIVRAPTLEAGLALVERNQADVLIGNAAALDGPLSARYLETLKVLGATGIDAS
TAFAVRGDLTPLVTLIDRALDAMSPFEQQQIRNRWTAAATERGGGWSVNALRLLPLLIVF
GVVLLVTLRAHALLQREMRRRRRAEQVLAKQVELQDTMMEMIPYPLGARDLDNRYLAVNR
AYEEVTGLSRGEVLGRTGATVAAWGAENSERVDDLYRKALETGESQRVELAFEGPGASGA
AGQCAGAEREKRHGIFWTRLCRDVHDAPFCVLGTMIDITDIRRAEMRARESERLLSDVTG
SLPVIVFQLRRHADGHYAFPYLAGDTQGPLGDSAAELMRANALDLSRVDSRDRARLAAKL
ERSARRLAPVNTEFRFECTPAPLWVRAEFVPRRVENGAVVWSGYAVDASVEHARADELAR
ARDLAEAASRAKDDFLAMMSHEIRTPMNGVLGLVEVLERTPLNPDQHQMVGMVHESAGAL
LQILDDLLDYSKIQAGRLVIDSEPFDVRELVDNAVGLLAGRAHEKGLRMRVDVEPGVAAQ
LRGDSGRLRQILFNLLSNAIKFTPHGEVSVGVAAQNLAHAADAPARQRVTLSVSDTGIGI
APQAQAQLFEPFVQAETSTTRRFGGTGLGLTICRKLAALMDGTLELQSELGRGTRLALHI
DLPVETLAVQANGVRGKRALVVCDDGGVAGALMHFGVSLGMEMTRLEPGARPLRALRTMV
KRGGVDLVFASEALAGALEGQGVPLLRLTENPKPSGYRVAENGVRVSINPLSWRGLSAAC
AMALSGLPNVAVRPADASESGLAAPDREKERAAGRLILVAEDHPVNQELIRHQLALLGFA
CDVVDDGAQALEALASERYGCLITDCHMPNVSGYDLARRVRELEGERGGRGERGGEGGRE
GSRKTADAPASAAARLPILGITANTAPENVRLCYEAGMDDCLIKPTRVATLREHLARWFG
AEGVHRAAEASAERGAACPHRAQRDDCAGCATSAECQVSAADSGATGSGTRELEPLDLAH
MIQVWGSEATVKTLLASFVSAVRDDLDALPPLLEDVDIAGLRDWHHRLAGAVGVLQYPAL
LAVLETYRRHMNSHTAEQLREEGFELIRTCHALLDNIEQQAALLA
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
ctggcgttggccttctgtctcgcgatcacgctgacgacagcattcgccgcccccgcccga
gcgcagcaagtcgcaaacgcgaacgcgaacagtgtcgccgccggaagccagacagccagc
atgccgtcacgcctcgtcgtgggcgtgctgacgggcggctggccgccgctcgaagtgctc
gacgagcatgcgctcagcggcttcagcgcggagtatctgcgtctgctcgtggggccgtcg
gtgcaactcgtgccgcgcgtctatcccgacatgagcgccttgctcgcgggcgcatgcgcg
ggcgaggtcgacgtgatcatgagcatcgcgcgcgtgccgcagcgcgagcgctgtctcgcg
ttcacggtgccctacctgagcggcggaagcgcgttcgtcacgcgcgcgggcaacgaggcg
gtcgccaccacggcgtcgcggctcgcgcacgcgcgcatcgcggtcgaaaaaggctatgtg
ttagaggcgatgctgcgcgagcgcttcccgcaagccaccctcgtcaccttcgcgaatacc
ggcgcggcgcttcatgccgtcgctcacggcgcggcggacgtttatgcgggattcgcgccc
gtcgtgcgctaccagctttcgttcgacgattacgccggtttgcgcgtggcgttcgaagtg
cgggtcaacgtgcgcgaactgcgctttggcgtgccggtttcgaagatcgcgctgcgcgat
cgcctgaacgtgctggcgagcggcgtgcgtccggccgccgcgacggcgctgcaggcgcgc
tggctcgacggtcatccggcggcaggggcagacgacgcccagacgaccggcgcgcaacgc
gtgccgccgtttacgctcgacgcccgcgagcgcgcgtggctggcggcattgccgccgctc
aaggtgggcttcgatgcggactggctgccgttcagcgcgatggctgcgcgcgacggtgcg
acgggcatggccaacgattatctcgattacctgagccgcacgctcggcgtgaccttcacg
cgcgtgccggtcgccaactggctgggcgtcgacgcgccgttccggcgcggcgatttcgcg
ctgctcgccgccgcaaccgacgaaggcgtgttgtccgaaggcacgcgctacacgcaggcc
tacgaacgttatccgctcgtgatcgtggggcgtcgcgacgagccgatgtcgcgcggtctc
aaggactatgcgacacgccgcgtggtgttgtcgccgcatgcgccgccgtcttccttgctg
ttcggcagcgcggtgccggcgcagatcgtgcgcgcgcccacgctcgaagccgggctcgcg
ctcgtcgagcgcaatcaggccgacgtgctgatcggcaacgcggcggcgctcgacggaccg
ctgagcgcgcgctatctggagacgctcaaggtgctcggcgcgaccggcatcgacgcgtcg
acggccttcgcggtgcgcggcgaccttactccgctcgtcacgctgatcgaccgcgcgctc
gacgccatgtcgccgttcgagcagcagcagatccgcaatcgctggaccgccgcggcaact
gagcgcggcggcggctggagcgtgaatgcgctgcgtctgttgccgcttctgatcgtgttc
ggcgtggtgctgctcgttacactgcgcgcccatgcgctgctgcagcgcgagatgcgccgc
cgccggcgcgccgagcaggtgctcgccaaacaggtcgagctgcaggacacgatgatggag
atgatcccgtacccgctcggtgcgcgcgacctcgacaaccgctatctcgcggtaaaccgc
gcctacgaggaggtgaccgggctgtcgcgcggcgaggtgctgggccgtaccggcgcgacg
gtggcggcgtggggtgcggagaacagcgagcgcgtcgacgacctgtaccgcaaggcgctg
gagacgggcgagagccagcgcgtcgaactggccttcgagggaccgggcgcttccggcgcg
gcgggccagtgcgccggggcggaacgcgaaaaacgccacggcattttctggacgcgcctg
tgccgcgacgtgcatgacgcgccgttttgcgtactcggcacgatgatcgacatcaccgat
atccgccgcgccgaaatgcgcgcgcgcgagtcggagcggttgctgtcggacgtcaccggc
tcgctgcccgtgatcgtgttccagctgcgccgtcatgccgacggacactacgcattcccg
tatctcgcgggcgacacgcaagggccgctcggcgattccgccgccgaactcatgcgcgcg
aacgcgctcgatctgtcgcgcgtggacagccgcgaccgcgcgcggctcgcggcgaagctc
gaacggtcggcgcggcggctcgcgccggtcaacaccgagtttcgtttcgagtgcacgccc
gccccgctgtgggtgcgcgcggaattcgtgccgcgccgtgtcgaaaacggcgcggtcgtc
tggagcggctatgcggtggatgcgagcgtcgaacacgcgcgcgccgacgagctggcccgc
gcgcgcgatctcgccgaggcggcctcgcgcgccaaggacgacttcctcgccatgatgagc
cacgagatccgcacgcccatgaacggcgtgctcggcctcgtggaagtgctcgaacgcacg
ccgctgaatccggatcagcatcagatggtgggcatggtgcacgaatcggcgggcgcgctg
ctgcagatcctcgacgacctgctcgattattcgaagatccaggcggggcggctggtgatc
gactcggagccgttcgacgtgcgcgagctggtcgacaacgccgttggactgctcgccggc
cgcgcgcacgagaaagggctgcgcatgcgcgtggacgtcgaacccggcgtggcggcgcag
ctacgcggcgacagcgggcgcctgcgtcagattctcttcaatctgctcagcaatgcgatc
aaattcacgccgcacggcgaggtgagcgtgggcgtggcggcgcagaacctcgcgcacgcc
gccgacgcgcccgcgcgccagcgcgtgacgctgtcggtctccgacaccggcatcggcatc
gcgccgcaggctcaggcgcaactcttcgagccgttcgtgcaggccgaaacctccaccacg
cggcgcttcggcggcacgggtctgggcctgacgatctgccgcaagctcgcggcgctgatg
gacggcacgctcgaattgcagagcgaactgggtcgcggtacgcgcctcgcactgcatatc
gatctgccggtcgaaacgctcgccgtgcaggcgaacggtgtgcgcggcaagcgcgcgctg
gtggtctgcgacgatggcggcgtggcgggcgcgttgatgcatttcggcgtgtcgctcggc
atggagatgacgcgtctggagcccggcgcgcgtccgctgcgggcgctgcgcacgatggtc
aaacgcggcggcgtcgatctcgtgttcgcgtcggaagcgctggcgggcgcgctggagggg
cagggcgtgccgctgctgcgtctgacggaaaatcccaagccgagcggctatcgcgtggcg
gagaacggcgtgcgcgtcagtattaatccgctttcgtggcgtgggctgagcgcggcgtgt
gcgatggcgctctcggggctgccgaacgtcgcggtgcgcccggccgacgcgtcggaaagc
ggactcgccgcgcccgatcgcgagaaggagcgcgcggcgggccgcctgatcctcgtggcc
gaagatcatccggtcaaccaggaattgatccgtcatcagctcgcgctgctcggcttcgcg
tgcgatgtggtcgacgacggcgcacaggcgctcgaggcgctggcgagcgagcgctacggc
tgcctcatcaccgactgtcatatgccgaacgtctcgggctacgacctcgcgcgccgcgtg
cgcgaactcgaaggcgagcgcgggggccggggagaacgcgggggagaaggcggccgggaa
ggaagccgaaagacagccgatgcacccgcgagtgccgccgcccgcttgccgattctcggc
atcaccgccaacaccgcaccggaaaatgtgcgcctgtgctacgaggcgggcatggacgat
tgcctcatcaagcccacgcgcgtcgcgacgctgcgcgagcatctcgcgcgctggttcggc
gcggagggcgtgcatcgcgcggcggaggcgtcggcggagcgcggcgctgcctgtccgcat
cgcgcgcagcgcgacgattgcgccggctgcgccacaagcgcggaatgccaggtctcggcc
gccgactcgggggcaacgggatcaggaacgcgcgagctggaaccgctcgacctcgcgcac
atgattcaggtgtggggcagcgaagcgacggtgaagacgttgctcgcttcgttcgtgagc
gccgtgcgcgacgatctggacgcgctgccgccgctgctcgaagacgtggatatcgcgggc
ttgcgcgactggcatcaccggctcgcgggcgcggtgggcgtgctgcaatatccggcgctg
cttgcggtgctcgaaacgtatcgccgtcacatgaacagtcacacagcggagcaattgcgc
gaagagggcttcgagttgattcgcacttgccatgcgctgctcgacaacatcgagcagcag
gcggcgctattggcctaa
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