Paraburkholderia tropica: G5S35_02485
Help
Entry
G5S35_02485 CDS
T07044
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5S35_02485 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptro03019
]
G5S35_02485 (pcnB)
Enzymes [BR:
ptro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
G5S35_02485 (pcnB)
Messenger RNA biogenesis [BR:
ptro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G5S35_02485 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Tad_C
Motif
Other DBs
NCBI-ProteinID:
QNB10545
LinkDB
All DBs
Position
A:complement(557962..559572)
Genome browser
AA seq
536 aa
AA seq
DB search
MIKKFIRKLFGQDDSAAAHDDAGAQAAASHSASDDEAAPRTRRKPAAKSGTRATLTKPRA
AMGASEPISPVILSADVHGINPSLISRNAVRVTEGLQQAGFRAFIVGGAVRDLLLGVAPK
DFDVATDATPDQVQKLFRRARIIGRRFQIVHVQFGQEIIEVSTFRALVDAPPPPAESAPP
AKRMRRDELDRKTHHVDASGRVLRDNVWGEQHEDATRRDFTINAMYYDPATQTVLDYHNG
MADMRARLLRMIGDPATRYREDPVRMLRVVRFAAKLGFDIEENTRGPIQDLADLINNVPA
ARLFDEMLKLLLSGHALECLKWLRKEGLHHGLLPLLDVVLEQPQGERFISLALSSTDARV
RAGKPVSPGFLFATLLWHDVQQRLQQYTAEGEFPVPALHRAMDDVIDAQTEKLAIHRRFS
SDMREIWGLQLRLEKRGRSAIKLLEHPRFRAGYDFLLLRCESGELDAEIGQWWTDFISGD
PTARETLLTQGGTKERSPRKRRRRGGAKRKTGEAAVGAESAGADGSFGDDGNPHED
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaaattcatccgcaagctgttcggccaggacgacagcgccgccgcgcacgac
gacgcaggcgcgcaagccgcagcctcccactccgcatccgacgacgaagccgcgccccgc
acgcgccgcaagcccgctgcaaagtccggcacgcgcgccacgctcaccaagccgcgcgcc
gccatgggcgcgagcgagccgatctcgcccgtgatcctctcggccgacgtgcacggcatc
aacccgtcgctgatctcccgcaacgccgtgcgcgtgaccgaaggcctgcagcaagcgggt
tttcgcgcgttcatcgtcggcggcgcggtgcgcgacctgctgctcggcgtcgcgcccaag
gacttcgacgtggccacggacgccacgcccgaccaggtgcagaagctgttccgccgcgcg
cgcatcatcggccgccgcttccagatcgtgcacgtgcagttcggccaggaaatcatcgaa
gtctcgactttccgcgcgctcgtcgatgcaccgccgccgcccgccgaatcggctccgccg
gccaagcgcatgcgccgcgacgaactcgaccgcaagacgcaccacgtcgacgcgagcggc
cgcgtgctgcgcgacaacgtctggggcgagcagcacgaggacgccacgcgccgcgacttc
acgatcaacgcgatgtactacgatccggccacgcaaaccgtgctggactaccacaacggc
atggccgacatgcgcgcgcgcctgctgcgcatgatcggcgacccggccacgcgttatcgc
gaagatccggtgcgcatgctgcgcgtggtgcgtttcgcggccaagctcggtttcgacatc
gaagaaaacacccgcggtccgattcaggatctcgccgacctcatcaacaacgtgcctgcg
gcgcgtctgttcgacgagatgctcaagctgctgctctcgggtcacgcgctcgaatgcctc
aagtggctgcgcaaggaaggcctgcatcacggcctgctgccgctgctcgacgtggtcctc
gaacagccgcagggcgagcgcttcatctcgctcgcgctgtccagcaccgacgcgcgcgtg
cgtgcgggcaagccggtttcgccgggcttcctgttcgccacgctgctctggcacgacgtg
cagcagcgtctgcagcaatacacggccgagggcgaattcccggtgccggcgctgcaccgc
gcgatggacgacgtgatcgacgcgcaaacggagaaactggcgatccatcgccgcttctcg
tcggatatgcgcgaaatctggggcctgcaactgcgcctcgaaaagcgcggccgcagcgcc
atcaagctgctggagcatccgcgtttccgcgcgggctatgatttcctgctgctgcgctgc
gaatcgggcgagctcgacgccgaaatcggccaatggtggaccgatttcatcagcggcgac
ccgaccgcgcgcgaaaccctgctcacgcagggcggcacgaaagagcgttcgccgcgcaag
cgccgccgtcgcggcggagcgaaacgcaaaacgggcgaagccgcggtgggcgccgaaagc
gccggcgcggatggctcgttcggcgacgacggcaacccgcacgaggactga
DBGET
integrated database retrieval system
