Paraburkholderia tropica: G5S35_03030
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Entry
G5S35_03030 CDS
T07044
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro00521
Streptomycin biosynthesis
ptro00523
Polyketide sugar unit biosynthesis
ptro00525
Acarbose and validamycin biosynthesis
ptro00541
Biosynthesis of various nucleotide sugars
ptro01100
Metabolic pathways
ptro01110
Biosynthesis of secondary metabolites
ptro01250
Biosynthesis of nucleotide sugars
Module
ptro_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G5S35_03030 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G5S35_03030 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
G5S35_03030 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G5S35_03030 (rfbB)
00525 Acarbose and validamycin biosynthesis
G5S35_03030 (rfbB)
Enzymes [BR:
ptro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
G5S35_03030 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QNB10647
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Position
A:688740..689801
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AA seq
353 aa
AA seq
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MILVTGGAGFIGANFVLDWLSQADEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICD
REALDTLFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNTLPEA
EKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPV
LTTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLAR
GKSGETYNVGGWNEKKNLEVVHTLCDLLDEMRPKAAGSYRDQITYVTDRPGHDRRYAIDA
RKLERELGWKPAETFETGLAKTVRWYLDNQAWADEVASGDYRKWVETNYAQRT
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgattctcgtaacgggcggtgccggctttatcggcgccaattttgtgcttgattggctg
agccaggccgacgaagccgttctcaacgtagacaagctgacctacgcgggcaatcttggg
acgttgaagtcgttgcagggcaacccgaagcacgtgttcgcccgtgtggacatctgcgac
cgcgaggcgctcgacacgctgttcgccgagcacaagccgcgcgccgtgctgcatttcgcc
gcggaaagccacgtcgaccgctcgattcatggtccggccgattttgttcagacgaatgtg
gtcggtaccttcacgctgctcgaagccacgcgtcagtactggaacacgctgcccgaagcc
gagaaagccgctttccgcttcctgcacgtctcgaccgacgaagtgttcggctcgctttcc
gcgaccgatccgcagttctcggaaaccacgccgtacgcgcccaacagcccgtactcggcc
accaaagccggttccgaccatctcgtacgcgcctaccatcacacgtatggtctgcctgtg
ctcacgaccaactgctcgaacaattacggtccgtaccagttccccgaaaagctcattccg
ctgatgatcgccaacgcgctcgccggcaagccgctgcccgtctacggtgacggtcagaac
gtgcgcgactggctttacgtgggtgatcattgcagcgcgatccgcgaagtgctcgcgcgc
ggcaagagcggcgaaacgtacaacgtcggcggctggaacgagaagaagaacctcgaagtc
gtgcacacgctgtgcgacctgctcgacgaaatgcgtccgaaggcagccggctcgtatcgc
gatcagattacctacgtgacggatcgcccgggtcacgaccgccgctacgcaatcgacgcg
cgcaagctcgaacgcgaactcggctggaagcccgcggaaacctttgaaaccggtctcgcg
aagacggtgcgctggtatctggacaaccaggcatgggccgacgaagtcgcttcgggcgac
tatcgcaagtgggtcgaaaccaactacgcgcaacgcacgtaa
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