Paraburkholderia tropica: G5S35_05485
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Entry
G5S35_05485 CDS
T07044
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ptro
Paraburkholderia tropica
Pathway
ptro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
G5S35_05485 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptro02000
]
G5S35_05485 (xylF)
Transporters [BR:
ptro02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
G5S35_05485 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
BRCT
zf-C2H2_12
Adhesin_P1_N
Motif
Other DBs
NCBI-ProteinID:
QNB11076
LinkDB
All DBs
Position
A:1216419..1217447
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AA seq
342 aa
AA seq
DB search
MQFAKRRSVLGALVCGAVLASLSLAAPLAHASKDHPEIGFCIDDLRVERWSRDRDYFVAA
AEKLGAKVSVQSADASEERQISQIENLISRGVDVIVIVPFNSKTLGNVVAEAKKAGIKVV
SYDRLILDANIDAYISFDNEKVGELQAQGVYNAQPKGNYFLLGGAPTDNNAKMLREGQLK
VLKPAIDRGDIKVVGQQWVPEWSASTALRIMEDALTANNNKIDAVVASNDGTAGGAIQAL
AAQHLAGKVPVSGQDADLAAVKRVVAGTQTMTVYKPLKLIAGEAAKLAVDLAKGQKPAYN
AQYDNGKKKVDTVLLQPTLLTKSNVDVVVKDGFYTQAQLASQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcgccaaacgccgttcggttctgggggcgctcgtttgcggcgccgtgctcgcg
agtctgtcgctggccgcgccgctcgcgcatgcgagcaaggatcatccggaaatcggtttc
tgtatcgacgatctgcgcgtcgagcgctggtcgcgcgatcgcgattacttcgttgcagca
gcggaaaaactcggcgcgaaagtgtcggtgcaatcggcggacgcgagcgaagaacgccag
atctcgcagatcgagaatctgatttcgcgcggcgtcgacgtgatcgtgatcgtgccgttc
aattcgaaaacgctcggcaacgtcgtggccgaagcgaagaaggcgggcatcaaggtggtg
tcgtacgaccgtctgattctcgacgccaacatcgacgcctatatctcgttcgacaacgag
aaggtcggcgagctgcaggcgcagggcgtgtataacgcgcagccgaagggcaactacttc
ctgctgggcggcgcgccgaccgacaacaacgcgaagatgctgcgcgaaggccagttgaag
gtgctcaagcccgcgatcgaccgcggcgacatcaaggtggtcggtcagcagtgggtgccg
gagtggagcgcgtcgacggcgctgcgcatcatggaagacgcgctcacggcgaataacaac
aagatcgacgcggtggtcgcgtcgaacgacggcacggcgggcggcgcgattcaggcgctg
gccgcgcagcatctcgcgggcaaggtgccggtctcgggtcaggacgcggatctcgcggcg
gtcaagcgtgtggtggccggtacgcagacgatgacggtctacaagccgctcaagctgatc
gcgggcgaagcggccaagctcgccgtcgatctcgcgaagggccagaagcccgcttataac
gcgcaatacgacaacggcaagaagaaggtcgacacggtgctgctgcaaccgacgctgctc
accaagagcaacgtcgacgtggtcgtgaaggacggcttctatacgcaggcgcaactggcc
agccagtaa
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