KEGG   Paraburkholderia tropica: G5S35_05805
Entry
G5S35_05805       CDS       T07044                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ptro  Paraburkholderia tropica
Pathway
ptro00010  Glycolysis / Gluconeogenesis
ptro00020  Citrate cycle (TCA cycle)
ptro00260  Glycine, serine and threonine metabolism
ptro00280  Valine, leucine and isoleucine degradation
ptro00310  Lysine degradation
ptro00380  Tryptophan metabolism
ptro00620  Pyruvate metabolism
ptro00630  Glyoxylate and dicarboxylate metabolism
ptro00640  Propanoate metabolism
ptro00670  One carbon pool by folate
ptro00785  Lipoic acid metabolism
ptro01100  Metabolic pathways
ptro01110  Biosynthesis of secondary metabolites
ptro01120  Microbial metabolism in diverse environments
ptro01200  Carbon metabolism
ptro01210  2-Oxocarboxylic acid metabolism
ptro01240  Biosynthesis of cofactors
Module
ptro_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ptro_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ptro_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ptro_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ptro00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    G5S35_05805 (lpdA)
   00020 Citrate cycle (TCA cycle)
    G5S35_05805 (lpdA)
   00620 Pyruvate metabolism
    G5S35_05805 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    G5S35_05805 (lpdA)
   00640 Propanoate metabolism
    G5S35_05805 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    G5S35_05805 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    G5S35_05805 (lpdA)
   00310 Lysine degradation
    G5S35_05805 (lpdA)
   00380 Tryptophan metabolism
    G5S35_05805 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    G5S35_05805 (lpdA)
   00670 One carbon pool by folate
    G5S35_05805 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptro04147]
    G5S35_05805 (lpdA)
Enzymes [BR:ptro01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     G5S35_05805 (lpdA)
Exosome [BR:ptro04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   G5S35_05805 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored AlaDh_PNT_C NAD_binding_8 GIDA Pyr_redox_3 GCV_H Biotin_lipoyl_2 Thi4 FAD_binding_2 FAD_binding_3 HI0933_like DAO 3HCDH_N
Other DBs
NCBI-ProteinID: QNB11132
LinkDB
Position
A:1296934..1298700
AA seq 588 aa
MSLVEVKVPDIGDFKDIDVIEVNIKPGDVIEKEQTLVSLESDKATMEVPSDVAGTVKEVK
IKAGDKASQGTLVAIVEVSEGAAAPAPKAEAPKAEAPKAAEAPKAAAPAPQAGSFSGSAD
VECDMLVLGAGPGGYSAAFRSADLGMKTVLVERYATLGGVCLNVGCIPSKALLHTALVID
EAALLESHGISFGKPQVDLDKLRDFKSGVVKKLTGGLAGMAKARKVEVVTGLGSFIDPHH
MEVAGEGGKKIVKFKQAIIAAGSQAVKLPFMPEDPRVVDSTGALELRQLPQKMLVIGGGI
IGLEMATVYSTLGAQIDVVEMLDGLMAGADRDLVKVWEKYNAKRFANVMLKTKTTKAEAK
EDGIYVTFEGEKAPAEAQRYDLVLVAVGRSPNGKKIGADRAGVAVTDRGFIEVDKQMRTN
VPHIFAIGDVVGQPMLAHKAVHEGHVAAEAAHGEKAYFDALQIPSVAYTDPEVAWAGKTE
EQCKAEGIKYGKAVFPWAASGRAIANGRDEGFTKLIFDEETHRVIGGGIVGLNAGDLISE
VCLAVEMGADATDIGKTIHPHPTLGESVGMAAELYEGVCTDLPPQKKK
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgagtctcgtcgaagtgaaagtgccggatatcggcgacttcaaggacatcgacgtcatc
gaagtcaacatcaagccgggcgacgtgatcgagaaggagcagacgctcgtctcgctcgag
tcggacaaggccacgatggaagtgcccagcgatgtcgcgggcacggtcaaggaagtgaag
atcaaggccggcgacaaggcgtcgcaaggcacgctggtcgcgatcgtcgaagtgtcggaa
ggcgcggctgcgcccgcgccgaaggccgaagcaccgaaggcggaagcgcccaaggcggcc
gaagcgccgaaggctgctgcgcccgcgccgcaagccggcagcttcagcggcagcgccgac
gtcgaatgcgacatgctcgtgctcggcgcgggccccggcggctactcggcggcgttccgc
tccgccgacctcggcatgaagaccgtgctggtcgagcgttatgcgacgctcggcggcgtg
tgtctgaacgtcggctgcattccgtcgaaggcgctgctgcacacggcgctggtgatcgac
gaagccgcgttgctcgaatcgcacggcatctcgttcggcaagccgcaagtcgatctcgac
aagctgcgcgacttcaagtcgggtgtcgtcaagaagctgaccggcggtctcgccggcatg
gccaaggcgcgcaaggtcgaagtcgtgacgggcctcggctcgttcatcgatccgcaccac
atggaagtggcgggcgagggcggcaagaagatcgtcaagttcaagcaggcgatcatcgca
gccggttcgcaggccgtgaagctgccgttcatgccggaagatccgcgcgtggtcgattcg
accggcgcgctggaactgcgtcagctgccgcagaagatgctggtgatcggcggcggcatc
atcggtctggaaatggcgaccgtttattcgacgctcggcgcgcagatcgacgtcgtggaa
atgctggacggcctgatggccggcgcggaccgcgatctcgtgaaggtctgggagaagtac
aacgcgaagcgcttcgcgaatgtcatgctcaagaccaaaacgacgaaggccgaagcgaag
gaagacggcatctacgtcacgttcgaaggcgaaaaggctccggccgaagcgcagcgttac
gacctcgtgctggtcgccgtgggccgctcgcccaatggcaagaagatcggcgcggacagg
gccggcgtggcggtgacggatcgcggcttcatcgaagtcgacaagcagatgcgcaccaac
gtgccgcacatcttcgcgatcggcgacgtggttggccagccgatgctcgcacacaaggcc
gtgcatgaaggccacgtggcggcggaagcggcgcacggcgagaaggcgtacttcgacgcg
ctgcagatcccgtcggtggcttacaccgatccggaagtggcgtgggccggcaagacggaa
gagcagtgcaaggccgaaggcatcaagtacggcaaggccgtgttcccgtgggccgcttcg
ggccgcgcgatcgccaatggccgcgacgagggcttcaccaagctgattttcgacgaagag
acgcatcgtgtgatcggcggcggcatcgtcggtctgaacgcgggcgatctgatcagcgaa
gtctgcctcgcggtggaaatgggcgcggacgcgaccgacatcggcaagacgattcacccg
cacccgacgctgggcgaatccgtcggcatggccgccgagctgtacgaaggcgtctgtacc
gatctgccgccgcagaaaaagaagtaa

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