Paraburkholderia tropica: G5S35_05945
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Entry
G5S35_05945 CDS
T07044
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro00541
Biosynthesis of various nucleotide sugars
ptro01100
Metabolic pathways
ptro01250
Biosynthesis of nucleotide sugars
Module
ptro_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G5S35_05945 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ptro01005
]
G5S35_05945 (kdsA)
Enzymes [BR:
ptro01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
G5S35_05945 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
ptro01005
]
Lipid A
G5S35_05945 (kdsA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Gly-rich_Ago1
Motif
Other DBs
NCBI-ProteinID:
QNB11159
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Position
A:1328950..1329804
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AA seq
284 aa
AA seq
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MNLCGFEVGLDKPFFLIAGTCVVESEQMTIDTAGRLKEITAKLGIPFIYKSSFDKANRSS
GKSFRGLGMDEGLRILSEVKRQLGLPVLTDVHTEEEVGPVASVVDVLQTPAFLCRQTDFI
HACARSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVS
DMRSLAIMRETAAPVVMDVTHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETH
PNPAQAKSDGPNAVPLNRMADLLETLVTLDQAVKRTPFLENDFN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtgcggtttcgaggtcggcctcgacaagccgttctttctgattgcaggcacc
tgtgtcgtcgaatccgaacagatgacgatcgacacggcgggccgcctgaaggaaatcacg
gcgaagctcggcattccgttcatctacaagtcgtcgttcgacaaggccaatcgctcgagc
ggcaagtcgttccgcggcctgggcatggacgaaggcctgcgcatcctctccgaagtgaag
cgccagctcggcctgcccgtgctgaccgacgtgcacacggaagaggaagtgggcccggtg
gcgtcggtcgtcgacgtgctgcagacgccggcgttcctgtgccgccagaccgacttcatc
cacgcgtgcgcgcgttcgggcaagccggtcaacatcaagaaaggccagttcctcgcgccg
cacgacatgaagaacgtgatcgacaaggcgcgcgacgcggcgcgtgaagcgggtctttcc
gaagaccgcttcatggcttgcgaacgcggtgtctcgttcggttacaacaacctcgtgtcc
gacatgcgctcgctcgcgatcatgcgcgagacggcggcgccggtcgtgatggacgtcacg
cactcggtgcaactgccgggcggccagggcaccagctcgggcggtcagcgcgaattcgtg
ccggtgctcgcgcgcgcggccgtcgcaacgggcgtggcgggtctcttcatggagacgcac
ccgaacccggcgcaagcgaagtccgacggtcccaacgccgtgccgctgaaccgcatggcc
gacctgctcgaaacgctcgtcacgctcgaccaggcggtcaagcgcacgccgttcctcgag
aacgacttcaactga
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